Escherichia coli RHB21-C11 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB21-C11 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,789,603 bp | CP057600 |
| plasmid pRHB21-C11_2: | 63,983 bp | CP057601 |
REBASE acronym: Eco21C11
Org_num: 43304
All begin HVX77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19970 | DUF4942 domain-containing protein | |||
| 19975 | M | M.Eco47C06ORF20265P (100% identity) | M.Eco21C11ORF19975P | |
| 19980 | S | S.Eco47C06ORF20265P (100% identity) | S.Eco21C11ORF19975P | |
| 19985 | R | EcoPM45ORF12025P (100% identity) | Eco21C11ORF19975P | |
| 19995 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco21C11DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.Eco47C06ORF2455P (100% identity) | ATGCAT | M.Eco21C11ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 8855 | 67 aa hypothetical protein | |||
| 8860 | M | M.KpnHs33ORF24605P (100% identity) | M.Eco21C11ORF8860P | |
| 8865 | phage holin, lambda family | |||
| 9095 | phosphohydrolase | |||
| 9100 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco21C11DcmP |
| 9105 | V | V.SflFF59DcmP (100% identity) | V.Eco21C11DcmP | |
| 9110 | drug/metabolite exporter YedA | |||
| 14245 | 92 aa hypothetical protein | |||
| 14250 | M | M.Lsp2021ORF20390P (100% identity) | M.Eco21C11ORF14250P | |
| 14255 | TrmB family transcriptional regulator | |||
| 21240 | phage lysis protein EssD | |||
| 21245 | M | M.Sso63633ORF22290P (100% identity) | M.Eco21C11ORF18085P | |
| 21250 | 67 aa hypothetical protein | |||
| 21280 | LexA family transcriptional regulator | |||
| 21285 | M | M.Eco05C01ORF985P (100% identity) | GATC | M.Eco21C11ORF21285P |
| 21290 | PerC family transcriptional regulator | |||
| plasmid pRHB21-C11_2 | ||||
| 23460 | 73 aa hypothetical protein | |||
| 23465 | M | M.EcoXJ61ORF24590P (100% identity) | M.Eco21C11ORF23465P | |
| 23470 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13225 | isocitrate dehydrogenase | |||
| 13230 | R | Efe1438GmrSDP (99% identity) | Eco21C11GmrSDP | |
| 13235 | recombinase family protein | |||
| 18035 | 604 aa hypothetical protein | |||
| 18040 | R | Eco730V1ORF8910P (100% identity) | Eco21C11ORF18040P | |
| 18045 | 438 aa hypothetical protein | |||