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Putative Escherichia coli RHB22-C02 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 4,952,850 bp | CP057589 |
plasmid pRHB22-C02_2: | 121,504 bp | CP057590 |
plasmid pRHB22-C02_3: | 100,275 bp | CP057591 |
plasmid pRHB22-C02_4: | 92,191 bp | CP057592 |
REBASE acronym: Eco22C02
Org_num: 43307
All begin HVX81_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
570 | 127 aa hypothetical protein | |||
575 | R | Eco22C23ORF580P (100% identity) | Eco22C02ORF580P | |
580 | M | M.Eco22C23ORF580P (100% identity) | M.Eco22C02ORF580P | |
585 | S | S.Eco22C23ORF580P (100% identity) | S.Eco22C02ORF580P | |
590 | thymidylate synthase | |||
9385 | tyrosine-type recombinase/integrase | |||
9390 | R | EcoXJ63ORF9345P (100% identity) | Eco22C02ORF9390P | |
9395 | M48 family metallopeptidase | |||
20190 | adenine/cytosine-specific restriction | |||
20195 | R | EcoXJ63ORF19820P (100% identity) | AACNNNNNNGTGC | Eco22C02ORF20200P |
20200 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco22C02ORF20200P |
20205 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco22C02ORF20200P |
20210 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2075 | cell division protein DamX | |||
2080 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco22C02DamP |
2085 | ribulose-phosphate 3-epimerase | |||
2605 | DUF2556 family protein | |||
2610 | M | M.Eco22C23ORF2610P (100% identity) | ATGCAT | M.Eco22C02ORF2610P |
2615 | DNA-binding transcriptional regulator Fis | |||
9060 | phosphohydrolase | |||
9065 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco22C02DcmP |
9070 | V | V.SsoSE61DcmP (100% identity) | V.Eco22C02DcmP | |
9075 | drug/metabolite exporter YedA | |||
11410 | DUF977 family protein | |||
??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco22C02ORF11415P | |
11420 | 60 aa hypothetical protein | |||
15300 | replication endonuclease | |||
15305 | M | M.Eco39C21ORF15550P (100% identity) | GATC | M.Eco22C02ORF15305P |
15310 | TraR/DksA family transcriptional regulator | |||
18345 | 321 aa hypothetical protein | |||
18350 | R | Sso8033ORF3755P (100% identity) | Eco22C02ORF18355P | |
18355 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco22C02ORF18355P | |
18360 | 257 aa hypothetical protein | |||
18485 | phage lysis protein EssD | |||
18490 | M | M.Sso63633ORF22290P (100% identity) | M.Eco22C02ORF18490P | |
18495 | TrmB family transcriptional regulator | |||
plasmid pRHB22-C02_2 | ||||
24115 | 73 aa hypothetical protein | |||
24120 | M | M.SflN92ORF24820P (100% identity) | M.Eco22C02ORF24120P | |
24125 | 101 aa hypothetical protein | |||
plasmid pRHB22-C02_3 | ||||
24295 | 97 aa hypothetical protein | |||
24300 | M | M.Sen527ORF25750P (100% identity) | M.Eco22C02ORF24300P | |
24305 | 73 aa hypothetical protein | |||
plasmid pRHB22-C02_4 | ||||
24715 | 226 aa hypothetical protein | |||
24720 | M | M.SenThORF23620P (100% identity) | M.Eco22C02ORF24720P | |
24725 | glutamine--tRNA ligase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20185 | GTPase | |||
20190 | R | SenHNK130MrrP (100% identity) | Eco22C02MrrP | |
20195 | type I restriction-modification system | |||
20210 | endoribonuclease SymE | |||
20215 | R | SenHNK130McrBP (100% identity) | Eco22C02McrBP | |
20220 | R | SenHNK130McrCP (100% identity) | Eco22C02McrCP | |
20225 | DEAD/DEAH box helicase |