Escherichia coli RHB24-C04 |
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Putative Escherichia coli RHB24-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,135,195 bp | CP057507 |
| plasmid pRHB24-C04_2: | 99,864 bp | CP057508 |
REBASE acronym: Eco24C04
Org_num: 43326
All begin HVY05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2435 | endoribonuclease SymE | |||
| ??? | S | S.Eco42C22ORF11485P (100% identity) | S.Eco24C04ORF2445P | |
| 2445 | M | M.Eco42C22ORF11485P (100% identity) | M.Eco24C04ORF2445P | |
| 2450 | R | Eco42C22ORF11485P (100% identity) | Eco24C04ORF2445P | |
| 2455 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2095 | BREX system P-loop protein BrxC | |||
| 2100 | RM | Eco10C05ORF2105P (100% identity) | Eco24C04ORF2100P | |
| 2105 | BREX-1 system phosphatase PglZ type A | |||
| 2220 | 678 aa hypothetical protein | |||
| 2225 | R | Ecoi362ORF3874P (100% identity) | Eco24C04ORF2225P | |
| 2230 | HNH endonuclease | |||
| 2640 | PerC family transcriptional regulator | |||
| 2645 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco24C04ORF2645P |
| 2650 | LexA family transcriptional regulator | |||
| 8120 | TrmB family transcriptional regulator | |||
| 8125 | M | M.EcoC9964ORF1930P (100% identity) | M.Eco24C04ORF8125P | |
| 8130 | 92 aa hypothetical protein | |||
| 9870 | TrmB family transcriptional regulator | |||
| 9875 | M | M.Eco10C05ORF9890P (100% identity) | M.Eco24C04ORF9875P | |
| 9885 | holin | |||
| 13560 | drug/metabolite exporter YedA | |||
| 13565 | V | V.SsoSE61DcmP (100% identity) | V.Eco24C04DcmP | |
| 13570 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco24C04DcmP |
| 13575 | phosphohydrolase | |||
| 17425 | 121 aa hypothetical protein | |||
| 17430 | R | Sso8033ORF3755P (100% identity) | Eco24C04ORF17435P | |
| 17435 | M | M.Eco10C05ORF17450P (100% identity) | M.Eco24C04ORF17435P | |
| 17440 | 257 aa hypothetical protein | |||
| 17600 | phage holin, lambda family | |||
| 17605 | M | M.Eco10C05ORF17620P (100% identity) | M.Eco24C04ORF17605P | |
| 17610 | TrmB family transcriptional regulator | |||
| 17640 | LexA family transcriptional regulator | |||
| 17645 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco24C04ORF17645P |
| 17650 | PerC family transcriptional regulator | |||
| 21285 | DNA-binding transcriptional regulator Fis | |||
| 21290 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco24C04ORF21290P |
| 21295 | DUF2556 family protein | |||
| 21840 | ribulose-phosphate 3-epimerase | |||
| 21845 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco24C04DamP |
| 21850 | cell division protein DamX | |||
| plasmid pRHB24-C04_2 | ||||
| 25060 | 73 aa hypothetical protein | |||
| 25065 | M | M.EcoWY5172ORF23370P (100% identity) | M.Eco24C04ORF25065P | |
| 25070 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2425 | R | Eco42C22McrCP (100% identity) | Eco24C04McrCP | |
| 2430 | R | Eco42C22McrBP (100% identity) | Eco24C04McrBP | |
| 2435 | endoribonuclease SymE | |||
| 2450 | type I restriction-modification system | |||
| 2455 | R | Ssp28760MrrP (100% identity) | Eco24C04MrrP | |
| 2460 | GTPase | |||