Escherichia coli RHB24-C21 |
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Putative Escherichia coli RHB24-C21 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,063,391 bp | CP057485 |
| plasmid pRHB24-C21_2: | 102,023 bp | CP057486 |
REBASE acronym: Eco24C21
Org_num: 43070
All begin HVY15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12635 | DUF4942 domain-containing protein | |||
| 12640 | M | M.Eco24C11ORF12640P (100% identity) | M.Eco24C21ORF12640P | |
| 12645 | S | S.EcoPM45ORF12025P (100% identity) | S.Eco24C21ORF12640P | |
| 12650 | R | Eco45OAORFFP (100% identity) | Eco24C21ORF12640P | |
| 12660 | NADPH-dependent aldehyde reductase Ahr | |||
| 22050 | IS5-like element ISKpn26 family transposase | |||
| 22055 | M | M.Kva1423ORFAP (100% identity) | M.Eco24C21ORF22055P | |
| 22060 | S | S.Eco24C11ORF22055P (100% identity) | S.Eco24C21ORF22055P | |
| 22065 | 263 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7115 | PerC family transcriptional regulator | |||
| 7120 | M | M.Eco42C20ORF14205P (100% identity) | GATC | M.Eco24C21ORF7120P |
| 7125 | LexA family transcriptional regulator | |||
| 7155 | 67 aa hypothetical protein | |||
| 7160 | M | M.Sso63633ORF22290P (100% identity) | M.Eco24C21ORF7160P | |
| 7165 | phage lysis protein EssD | |||
| 9835 | 92 aa hypothetical protein | |||
| 9840 | M | M.EspP049ORF1957P (100% identity) | M.Eco24C21ORF9840P | |
| 9845 | TrmB family transcriptional regulator | |||
| 11910 | drug/metabolite exporter YedA | |||
| 11915 | V | V.SflFF64DcmP (100% identity) | V.Eco24C21DcmP | |
| 11920 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco24C21DcmP |
| 11925 | phosphohydrolase | |||
| 12155 | phage holin, lambda family | |||
| 12160 | M | M.KpnHs33ORF24605P (100% identity) | M.Eco24C21ORF12160P | |
| 12165 | 67 aa hypothetical protein | |||
| 17295 | cell division protein DamX | |||
| 17300 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco24C21DamP |
| 17305 | ribulose-phosphate 3-epimerase | |||
| 17850 | DUF2556 family protein | |||
| 17855 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.Eco24C21ORF17855P |
| 17860 | DNA-binding transcriptional regulator Fis | |||
| 19545 | type I restriction-modification system subunit M | |||
| 19550 | RM | Eco24C11ORF19555P (100% identity) | CTGAAG | Eco24C21ORF19555P |
| 19555 | M | M.EcoC9969I (100% identity) | CTGAAG | M.Eco24C21ORF19555P |
| 19560 | 62 aa hypothetical protein | |||
| 19595 | DEAD/DEAH box helicase family protein | |||
| 19600 | M | M.PmiCZP44ORF11275P (100% identity) | M.Eco24C21ORF19600P | |
| 19605 | DUF3780 and DUF4357 domain-containing protein | |||
| 22895 | recombination protein NinB | |||
| 22900 | M | M.EcoMS851ORF16910P (100% identity) | GATC | M.Eco24C21ORF22900P |
| 22905 | NinE family protein | |||
| 24385 | tail fiber assembly protein | |||
| 24390 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco24C21ORF24390P | |
| 24395 | R | Eco24C11ORF24390P (100% identity) | Eco24C21ORF24390P | |
| 24400 | DinI-like family protein | |||
| plasmid pRHB24-C21_2 | ||||
| 25080 | 73 aa hypothetical protein | |||
| 25085 | M | M.EcoWY5172ORF23370P (100% identity) | M.Eco24C21ORF25085P | |
| 25090 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19530 | ISL3 family transposase | |||
| 19535 | R | Eco24C11McrBP (100% identity) | Eco24C21McrBP | |
| 19540 | R | Eco24C11McrCP (100% identity) | Eco24C21McrCP | |
| 19545 | type I restriction-modification system subunit M | |||
| 19585 | transposase | |||
| 19590 | R | PmiCZP44MrrP (100% identity) | Eco24C21MrrP | |
| 19595 | DEAD/DEAH box helicase family protein | |||