Escherichia coli RHB26-C15 |
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Putative Escherichia coli RHB26-C15 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,807,288 bp | CP057453 |
| plasmid pRHB26-C15_2: | 4,315 bp | CP057454 |
REBASE acronym: Eco26C15
Org_num: 43079
All begin HVY32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11245 | adenine/cytosine-specific restriction | |||
| 11250 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco26C15ORF11255P |
| 11255 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco26C15ORF11255P |
| 11260 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco26C15ORF11255P |
| 11265 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 780 | phosphohydrolase | |||
| 785 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco26C15DcmP |
| 790 | V | V.SflFF64DcmP (100% identity) | V.Eco26C15DcmP | |
| 795 | drug/metabolite exporter YedA | |||
| 2740 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco26C15ORF2745P | |
| 2750 | 60 aa hypothetical protein | |||
| 9555 | LexA family transcriptional regulator | |||
| 9560 | M | M.EcoXH990ORF8990P (100% identity) | GATC | M.Eco26C15ORF9560P |
| 9565 | PerC family transcriptional regulator | |||
| 16575 | cell division protein DamX | |||
| 16580 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco26C15DamP |
| 16585 | ribulose-phosphate 3-epimerase | |||
| 17130 | DUF2556 family protein | |||
| 17135 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco26C15ORF17135P |
| 17140 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB26-C15_2 | ||||
| 22950 | Rop family plasmid primer RNA-binding protein | |||
| 22955 | M | M.SenSL26ORF25460P (100% identity) | AAGCTT | M.Eco26C15ORF22955P |
| 22940 | R | SenSL26ORF25460P (100% identity) | AAGCTT | Eco26C15ORF22955P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11240 | GTPase | |||
| 11245 | R | EcosS1MrrP (100% identity) | Eco26C15MrrP | |
| 11250 | type I restriction-modification system | |||