Escherichia coli RHB26-C20 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB26-C20 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,058,596 bp | CP057447 |
| plasmid pRHB26-C20_2: | 103,113 bp | CP057448 |
REBASE acronym: Eco26C20
Org_num: 43081
All begin HVY34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10355 | transcription factor | |||
| 10360 | M | M.EcoSTEC639ORF18270P (100% identity) | M.Eco26C20ORF10360P | |
| 10365 | S | S.EcoSTEC639ORF18270P (100% identity) | S.Eco26C20ORF10360P | |
| 10370 | DUF4433 domain-containing protein | |||
| 10375 | macro domain-containing protein | |||
| 10380 | R | EcoSTEC639ORF18270P (100% identity) | Eco26C20ORF10360P | |
| 10385 | M48 family metallopeptidase | |||
| 16070 | DUF600 family protein | |||
| 16075 | R | EcoJNUORF15575P (100% identity) | Eco26C20ORF16080P | |
| 16080 | M | M.EcoJNUORF15575P (100% identity) | M.Eco26C20ORF16080P | |
| 16085 | S | S.EcoJNUORF15575P (100% identity) | S.Eco26C20ORF16080P | |
| 16090 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 990 | phosphohydrolase | |||
| 995 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco26C20DcmP |
| 1000 | V | V.SsoSE61DcmP (100% identity) | V.Eco26C20DcmP | |
| 1005 | drug/metabolite exporter YedA | |||
| 5525 | DUF1367 family protein | |||
| 5530 | R | EcosEC21ORF11865P (100% identity) | Eco26C20ORF5535P | |
| 5535 | M | M.Eco26C12ORF14300P (100% identity) | M.Eco26C20ORF5535P | |
| 5540 | DUF977 family protein | |||
| 7160 | replication endonuclease | |||
| 7165 | M | M.Sen30575ORF16925P (100% identity) | GATC | M.Eco26C20ORF7165P |
| 7170 | TraR/DksA family transcriptional regulator | |||
| 12640 | sigma 54-interacting transcriptional regulator | |||
| 12645 | R | EcoSCU125ORF12165P (100% identity) | Eco26C20ORF12645P | |
| 12650 | IS3-like element IS911 family transposase | |||
| 17570 | cell division protein DamX | |||
| 17575 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco26C20DamP |
| 17580 | ribulose-phosphate 3-epimerase | |||
| 18125 | DUF2556 family protein | |||
| 18130 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco26C20ORF18130P |
| 18135 | DNA-binding transcriptional regulator Fis | |||
| 23515 | 67 aa hypothetical protein | |||
| 23520 | M | M.Eal29ORF10050P (100% identity) | M.Eco26C20ORF23520P | |
| 23525 | phage lysis protein EssD | |||
| plasmid pRHB26-C20_2 | ||||
| 24645 | 73 aa hypothetical protein | |||
| 24650 | M | M.SflN92ORF24820P (100% identity) | M.Eco26C20ORF24650P | |
| 24655 | 101 aa hypothetical protein | |||