Escherichia coli RHB27-C06 |
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Putative Escherichia coli RHB27-C06 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,712,964 bp | CP057429 |
| plasmid pRHB27-C06_2: | 96,190 bp | CP057430 |
| plasmid pRHB27-C06_3: | 52,356 bp | CP057431 |
REBASE acronym: Eco27C06
Org_num: 43087
All begin HVY41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19585 | restriction endonuclease | |||
| 19590 | M | M.SflSTLE3ORF19325P (100% identity) | M.Eco27C06ORF19590P | |
| 19595 | S | S.SflSTLE3ORF19325P (50% identity) | S1.Eco27C06ORF19590P | |
| 19600 | IS1-like element IS1A family transposase | |||
| 19605 | S | S2.Eco27C18ORF19615P (100% identity) | S2.Eco27C06ORF19590P | |
| 19610 | R | SflSTLE3ORF19325P (100% identity) | Eco27C06ORF19590P | |
| 19615 | endoribonuclease SymE | |||
| plasmid pRHB27-C06_2 | ||||
| 23270 | DNA polymerase III subunit theta | |||
| 23275 | M | M.Eco27C18ORF23300P (100% identity) | GAANNNNNNTAYG | M.Eco27C06ORF23275P |
| 23280 | S | S.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | S.Eco27C06ORF23275P |
| 23285 | R | Eco34C14ORF22480P (100% identity) | GAANNNNNNTAYG | Eco27C06ORF23275P |
| 23290 | 3-phosphatase | |||
| plasmid pRHB27-C06_3 | ||||
| 23455 | IS3 family transposase | |||
| 23460 | R | SflSTLE3ORF22785P (100% identity) | Eco27C06ORF23475P | |
| 23465 | DUF4268 domain-containing protein | |||
| 23470 | S | S.Eco27C18ORF23500P (100% identity) | S.Eco27C06ORF23475P | |
| 23475 | M | M.Sen557928ORF18960P (62% identity) | M.Eco27C06ORF23475P | |
| 23480 | regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1760 | cell division protein DamX | |||
| 1765 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco27C06DamP |
| 1770 | ribulose-phosphate 3-epimerase | |||
| 2385 | DUF2556 family protein | |||
| 2390 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco27C06ORF2390P |
| 2395 | DNA-binding transcriptional regulator Fis | |||
| 3425 | DEAD/DEAH box helicase | |||
| 3430 | RM | SflLIN17ORF3140P (100% identity) | Eco27C06ORF3430P | |
| 3435 | transposase | |||
| 9065 | phosphohydrolase | |||
| 9070 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco27C06DcmP |
| 9075 | V | V.SflFF64DcmP (100% identity) | V.Eco27C06DcmP | |
| 9080 | drug/metabolite exporter YedA | |||
| plasmid pRHB27-C06_2 | ||||
| 23380 | SPFH/Band 7/PHB domain protein | |||
| 23400 | M | M.Eco34C14ORF22605P (100% identity) | M.Eco27C06ORF23400P | |
| 23405 | recombination-associated protein RdgC | |||