Escherichia coli RHB27-C22 |
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Putative Escherichia coli RHB27-C22 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,130,725 bp | CP057396 |
| plasmid pRHB27-C22_2: | 243,494 bp | CP057397 |
| plasmid pRHB27-C22_4: | 110,894 bp | CP057399 |
| plasmid pRHB27-C22_5: | 97,590 bp | CP057400 |
REBASE acronym: Eco27C22
Org_num: 43093
All begin HVY48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18840 | GTPase family protein | |||
| 18845 | M | M.EcosEC71ORF17675P (100% identity) | M.Eco27C22ORF18845P | |
| 18850 | S | S.EcoFLI21ORF16100P (100% identity) | S.Eco27C22ORF18845P | |
| 18855 | R | EcosEC71ORF17675P (100% identity) | Eco27C22ORF18845P | |
| 18860 | IS5 family transposase | |||
| 20620 | restriction endonuclease | |||
| 20625 | M | M.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | M.Eco27C22ORF20625P |
| 20630 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.Eco27C22ORF20625P |
| 20635 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | Eco27C22ORF20625P |
| 20640 | endoribonuclease SymE | |||
| 21060 | DUF600 family protein | |||
| 21065 | R | Ecos641ORF2625P (100% identity) | Eco27C22ORF21085P | |
| 21070 | SAM-dependent DNA methyltransferase | |||
| 21075 | IS21-like element ISEc12 family transposase | |||
| 21080 | ATP-binding protein | |||
| 21085 | M | M.Ecos641ORF2625P (87% identity) | M.Eco27C22ORF21085P | |
| 21090 | S | S.Ecos641ORF2625P (100% identity) | S.Eco27C22ORF21085P | |
| 21095 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1710 | cell division protein DamX | |||
| 1715 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco27C22DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco27C22ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 9620 | phosphohydrolase | |||
| 9625 | M | M.EcoS792DcmP (100% identity) | CCWGG | M.Eco27C22DcmP |
| 9630 | V | V.SflC32DcmP (74% identity) | V.Eco27C22DcmP | |
| 9635 | drug/metabolite exporter YedA | |||
| 16275 | NinE family protein | |||
| 16280 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco27C22ORF16280P |
| 16285 | recombination protein NinB | |||
| 20815 | HNH endonuclease | |||
| 20820 | R | SflFF17ORF19275P (100% identity) | Eco27C22ORF20820P | |
| 20825 | 59 aa hypothetical protein | |||
| plasmid pRHB27-C22_2 | ||||
| 25535 | 55 aa hypothetical protein | |||
| 25540 | M | M.YpsF1ORFCP (100% identity) | M.Eco27C22ORF25540P | |
| 25545 | thermonuclease family protein | |||
| 25940 | DNA-binding protein | |||
| 25945 | M | M.YpsF1ORFDP (100% identity) | M.Eco27C22ORF25945P | |
| 25950 | 284 aa hypothetical protein | |||
| plasmid pRHB27-C22_4 | ||||
| 26945 | 103 aa hypothetical protein | |||
| 26950 | M | M.EcoV04ORF25795P (100% identity) | SAY | M.Eco27C22ORF26950P |
| 26955 | 73 aa hypothetical protein | |||
| plasmid pRHB27-C22_5 | ||||
| 27530 | 104 aa hypothetical protein | |||
| 27535 | M | M.SspPIBORF23080P (100% identity) | M.Eco27C22ORF27535P | |
| 27540 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13920 | PT domain-containing protein | |||
| 13925 | R | EcoSW4848GmrSD2P (100% identity) | Eco27C22GmrSDP | |
| 13930 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14130 | LexA family transcriptional regulator | |||
| 14135 | M | M.EcoR15ORF19935P (100% identity) | GATC | M.Eco27C22ORF14135P |
| 14140 | PerC family transcriptional regulator | |||