Escherichia coli RHB28-C11 |
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Putative Escherichia coli RHB28-C11 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,688,377 bp | CP057380 |
| plasmid pRHB28-C11_2: | 100,257 bp | CP057381 |
REBASE acronym: Eco28C11
Org_num: 43096
All begin HVY51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19360 | DUF262 domain-containing protein | |||
| 19365 | R | EcoXH993ORF23720P (100% identity) | Eco28C11ORF19370P | |
| 19370 | M | M.EcoZ503ORFCP (97% identity) | M.Eco28C11ORF19370P | |
| 19375 | S | S.Ecoa005ORF2260P (100% identity) | S.Eco28C11ORF19370P | |
| 19380 | endoribonuclease SymE | |||
| plasmid pRHB28-C11_2 | ||||
| 22730 | type II toxin-antitoxin system Phd/YefM family | |||
| 22735 | M | M.EcosS1ORF17110P (98% identity) | M.Eco28C11ORF22735P | |
| 22740 | S | S.Csa8399ORFEP (96% identity) | S.Eco28C11ORF22735P | |
| 22745 | R | EcoLR641ORF45460P (99% identity) | Eco28C11ORF22735P | |
| 22750 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | cell division protein DamX | |||
| 1700 | M | M.EcoZ503DamP (100% identity) | GATC | M.Eco28C11DamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 family protein | |||
| 2325 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco28C11ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 8780 | phosphohydrolase | |||
| 8785 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco28C11DcmP |
| 8790 | V | V.SsoSE61DcmP (100% identity) | V.Eco28C11DcmP | |
| 8795 | drug/metabolite exporter YedA | |||
| 19570 | IS630-like element ISEc33 family transposase | |||
| 19575 | R | EcostT2ORF19975P (100% identity) | GAAC | Eco28C11ORF19575P |
| 19580 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pRHB28-C11_2 | ||||
| 22845 | tellurite/colicin resistance protein | |||
| 22860 | M | M.EfeC13ORF24760P (100% identity) | M.Eco28C11ORF22860P | |
| 22865 | recombination-associated protein RdgC | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15260 | NinE family protein | |||
| 15265 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco28C11ORF15265P |
| 15270 | recombination protein NinB | |||