Escherichia coli RHB28-C14 |
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Putative Escherichia coli RHB28-C14 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,747,483 bp
GenBank #: CP057378
REBASE acronym: Eco28C14
Org_num: 43097
All begin HVY53_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1735 | cell division protein DamX | |||
| 1740 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco28C14DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 family protein | |||
| 2365 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco28C14ORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 8735 | phosphohydrolase | |||
| 8740 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco28C14DcmP |
| 8745 | V | V.SsoSE61DcmP (100% identity) | V.Eco28C14DcmP | |
| 8750 | drug/metabolite exporter YedA | |||
| 10710 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco28C14ORF10715P | |
| 10720 | 60 aa hypothetical protein | |||
| 14505 | replication endonuclease | |||
| 14510 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco28C14ORF14510P |
| 14515 | TraR/DksA family transcriptional regulator | |||
| 19480 | ProQ/FinO family protein | |||
| 19485 | M | M.SflFF24DndBP (100% identity) | M.Eco28C14DndBP | |
| 19490 | DNA phosphorothioation system sulfurtransferase | |||
| 19485 | DNA sulfur modification protein DndB | |||
| 19490 | M | M.SflFF24DndCP (100% identity) | M.Eco28C14DndCP | |
| 19495 | DNA sulfur modification protein DndD | |||
| 19490 | DNA phosphorothioation system sulfurtransferase | |||
| 19495 | M | M.SflFF24DndDP (100% identity) | M.Eco28C14DndDP | |
| 19500 | DNA sulfur modification protein DndE | |||
| 19495 | DNA sulfur modification protein DndD | |||
| 19500 | M | M.SflFF24DndEP (100% identity) | M.Eco28C14DndEP | |
| 19505 | DGQHR domain-containing protein | |||
| 19515 | accessory gene regulator B family protein | |||
| 19520 | R | EcosEC5DptHP (100% identity) | Eco28C14DptHP | |
| 19525 | DNA phosphorothioation-dependent restriction | |||
| 19520 | DNA phosphorothioation-dependent restriction | |||
| 19525 | R | SflFF24DptGP (100% identity) | Eco28C14DptGP | |
| 19530 | DNA phosphorothioation-dependent restriction | |||
| 19525 | DNA phosphorothioation-dependent restriction | |||
| 19530 | R | SflFF24DptFP (100% identity) | Eco28C14DptFP | |
| 19535 | porin family protein | |||
| 20280 | RM | Efe35473ORFCP (97% identity) | Eco28C14ORF20280P | |
| 20285 | DEAD/DEAH box helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19320 | IS1 family transposase | |||
| 19325 | R | EcoS536ORF22110P (56% identity) | Eco28C14ORF19330P | |
| ??? | M | M.SflN116ORF19490P (96% identity) | M.Eco28C14ORF19330P | |
| 19340 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13340 | transposase | |||
| 13345 | R | SflN97McrCP (100% identity) | Eco28C14McrCP | |
| 13350 | R | SflN97McrBP (100% identity) | Eco28C14McrBP | |
| 13355 | 141 aa hypothetical protein | |||