Escherichia coli RHB28-C15 |
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Putative Escherichia coli RHB28-C15 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,988,373 bp
GenBank #: CP057371
REBASE acronym: Eco28C15
Org_num: 43098
All begin HVY54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20370 | DUF262 domain-containing protein | |||
| 20375 | R | Eco13C21ORF20035P (100% identity) | Eco28C15ORF20380P | |
| 20380 | M | M.EcoRM9088ORF13950P (100% identity) | M.Eco28C15ORF20380P | |
| 20385 | S | S.Eco13C21ORF20035P (100% identity) | S.Eco28C15ORF20380P | |
| 20390 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1915 | cell division protein DamX | |||
| 1920 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco28C15DamP |
| 1925 | ribulose-phosphate 3-epimerase | |||
| 2470 | DUF2556 family protein | |||
| 2475 | M | M.Eco25C23ORF2690P (100% identity) | ATGCAT | M.Eco28C15ORF2475P |
| 2480 | DNA-binding transcriptional regulator Fis | |||
| 6425 | DUF1382 family protein | |||
| 6430 | M | M.Eco27C21ORF16485P (99% identity) | M.Eco28C15ORF6430P | |
| 6435 | PerC family transcriptional regulator | |||
| 9500 | phosphohydrolase | |||
| 9505 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco28C15DcmP |
| 9510 | V | V.EcoZYB62DcmP (100% identity) | V.Eco28C15DcmP | |
| 9515 | drug/metabolite exporter YedA | |||
| 11540 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco28C15ORF11545P | |
| 11550 | ISNCY family transposase | |||
| 16205 | NinE family protein | |||
| 16210 | M | M.EcoYSP81ORFGP (96% identity) | GATC | M.Eco28C15ORF16210P |
| 16215 | recombination protein NinB | |||
| 20610 | 52 aa hypothetical protein | |||
| 20615 | R | Ecoc171ORF20410P (100% identity) | Eco28C15ORF20615P | |
| 20620 | HNH endonuclease | |||
| 20665 | 5-nucleotidase | |||
| 20670 | R | EcoZYB39ORF460P (100% identity) | Eco28C15ORF20670P | |
| 20675 | integrase | |||
| 21460 | RM | Eco3C16ORF3775P (100% identity) | Eco28C15ORF21460P | |
| 21465 | DEAD/DEAH box helicase | |||