Escherichia coli RHB29-C08 |
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Putative Escherichia coli RHB29-C08 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,959,026 bp
GenBank #: CP057349
REBASE acronym: Eco29C08
Org_num: 43102
All begin HVY61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11830 | adenine/cytosine-specific restriction | |||
| 11835 | R | Eco42C22ORF11485P (100% identity) | Eco29C08ORF11840P | |
| 11840 | M | M.Eco42C22ORF11485P (100% identity) | M.Eco29C08ORF11840P | |
| ??? | S | S.Eco42C22ORF11485P (100% identity) | S.Eco29C08ORF11840P | |
| 11850 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1065 | TrmB family transcriptional regulator | |||
| 1070 | M | M.Eco42C22ORF1045P (100% identity) | M.Eco29C08ORF1070P | |
| 1080 | holin | |||
| 1270 | phosphohydrolase | |||
| 1275 | M | M.Eco42C22DcmP (100% identity) | CCWGG | M.Eco29C08DcmP |
| 1280 | V | V.Ecostr9DcmP (74% identity) | V.Eco29C08DcmP | |
| 1285 | drug/metabolite exporter YedA | |||
| 7125 | protein ninF | |||
| 7130 | M | M.Eco29C22ORF7125P (100% identity) | M.Eco29C08ORF7130P | |
| 7135 | NinE family protein | |||
| 11635 | LexA family transcriptional regulator | |||
| 11640 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco29C08ORF11640P |
| 11645 | PerC family transcriptional regulator | |||
| 12070 | HNH endonuclease | |||
| 12075 | R | Ecoi362ORF3874P (100% identity) | Eco29C08ORF12075P | |
| 12080 | 59 aa hypothetical protein | |||
| 16900 | cell division protein DamX | |||
| 16905 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco29C08DamP |
| 16910 | ribulose-phosphate 3-epimerase | |||
| 17455 | DUF2556 family protein | |||
| 17460 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco29C08ORF17460P |
| 17465 | DNA-binding transcriptional regulator Fis | |||
| 20800 | PerC family transcriptional regulator | |||
| 20805 | M | M.Eco7011ORFEP (100% identity) | GATC | M.Eco29C08ORF20805P |
| 20810 | LexA family transcriptional regulator | |||
| 20835 | TrmB family transcriptional regulator | |||
| 20840 | M | M.Sen18578ORF17020P (100% identity) | M.Eco29C08ORF20840P | |
| 20845 | phage holin, lambda family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11825 | GTPase | |||
| 11830 | R | Ssp28760MrrP (100% identity) | Eco29C08MrrP | |
| 11835 | type I restriction-modification system | |||
| 11850 | endoribonuclease SymE | |||
| 11855 | R | Eco42C22McrBP (100% identity) | Eco29C08McrBP | |
| 11860 | R | Eco42C22McrCP (100% identity) | Eco29C08McrCP | |