Escherichia coli RHB29-C22 |
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Putative Escherichia coli RHB29-C22 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,959,026 bp
GenBank #: CP057336
REBASE acronym: Eco29C22
Org_num: 43108
All begin HVY67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11825 | adenine/cytosine-specific restriction | |||
| 11830 | R | Eco42C22ORF11485P (100% identity) | Eco29C22ORF11835P | |
| 11835 | M | M.Eco42C22ORF11485P (100% identity) | M.Eco29C22ORF11835P | |
| ??? | S | S.Eco42C22ORF11485P (100% identity) | S.Eco29C22ORF11835P | |
| 11845 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1060 | TrmB family transcriptional regulator | |||
| 1065 | M | M.Eco42C22ORF1045P (100% identity) | M.Eco29C22ORF1065P | |
| 1075 | holin | |||
| 1265 | phosphohydrolase | |||
| 1270 | M | M.Eco42C22DcmP (100% identity) | CCWGG | M.Eco29C22DcmP |
| 1275 | V | V.Ecostr9DcmP (74% identity) | V.Eco29C22DcmP | |
| 1280 | drug/metabolite exporter YedA | |||
| 7120 | protein ninF | |||
| 7125 | M | M.Eco29C08ORF7130P (100% identity) | M.Eco29C22ORF7125P | |
| 7130 | NinE family protein | |||
| 11630 | LexA family transcriptional regulator | |||
| 11635 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco29C22ORF11635P |
| 11640 | PerC family transcriptional regulator | |||
| 12065 | HNH endonuclease | |||
| 12070 | R | Ecoi362ORF3874P (100% identity) | Eco29C22ORF12070P | |
| 12075 | 59 aa hypothetical protein | |||
| 16895 | cell division protein DamX | |||
| 16900 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco29C22DamP |
| 16905 | ribulose-phosphate 3-epimerase | |||
| 17450 | DUF2556 family protein | |||
| 17455 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco29C22ORF17455P |
| 17460 | DNA-binding transcriptional regulator Fis | |||
| 20795 | PerC family transcriptional regulator | |||
| 20800 | M | M.Eco7011ORFEP (100% identity) | GATC | M.Eco29C22ORF20800P |
| 20805 | LexA family transcriptional regulator | |||
| 20830 | TrmB family transcriptional regulator | |||
| 20835 | M | M.Sen18578ORF17020P (100% identity) | M.Eco29C22ORF20835P | |
| 20840 | phage holin, lambda family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11820 | GTPase | |||
| 11825 | R | Ssp28760MrrP (100% identity) | Eco29C22MrrP | |
| 11830 | type I restriction-modification system | |||
| 11845 | endoribonuclease SymE | |||
| 11850 | R | Eco42C22McrBP (100% identity) | Eco29C22McrBP | |
| 11855 | R | Eco42C22McrCP (100% identity) | Eco29C22McrCP | |