Escherichia coli RHB33-C09 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB33-C09 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,898,357 bp | CP057204 |
| plasmid pRHB33-C09_2: | 174,003 bp | CP057205 |
REBASE acronym: Eco33C09
Org_num: 43127
All begin HVZ11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12065 | DUF262 domain-containing protein | |||
| 12070 | R | SspS13ORF3945P (100% identity) | GAGNNNNNNNGTCA | Eco33C09ORF12075P |
| 12075 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.Eco33C09ORF12075P |
| 12080 | S | S.EcoC9110I (100% identity) | GAGNNNNNNNGTCA | S.Eco33C09ORF12075P |
| 12085 | endoribonuclease SymE | |||
| plasmid pRHB33-C09_2 | ||||
| 24575 | 62 aa hypothetical protein | |||
| 24580 | R | Eco33C08ORF24575P (100% identity) | Eco33C09ORF24585P | |
| 24585 | M | M.Eco33C08ORF24580P (100% identity) | M.Eco33C09ORF24585P | |
| 24590 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 980 | TrmB family transcriptional regulator | |||
| 985 | M | M.Eco33C08ORF985P (100% identity) | M.Eco33C09ORF985P | |
| 995 | holin | |||
| 1230 | phosphohydrolase | |||
| 1235 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco33C09DcmP |
| 1240 | V | V.SsoSE61DcmP (100% identity) | V.Eco33C09DcmP | |
| 1245 | drug/metabolite exporter YedA | |||
| 16745 | cell division protein DamX | |||
| 16750 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco33C09DamP |
| 16755 | ribulose-phosphate 3-epimerase | |||
| 17380 | DUF2556 family protein | |||
| 17385 | M | M.Eco33C08ORF17385P (100% identity) | ATGCAT | M.Eco33C09ORF17385P |
| 17390 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB33-C09_2 | ||||
| 24275 | 101 aa hypothetical protein | |||
| 24280 | M | M.Eco33C08ORF24275P (100% identity) | M.Eco33C09ORF24280P | |
| 24285 | 73 aa hypothetical protein | |||