Escherichia coli RHB33-C12 |
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Putative Escherichia coli RHB33-C12 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,026,852 bp | CP057194 |
| plasmid pRHB33-C12_2: | 115,217 bp | CP057195 |
REBASE acronym: Eco33C12
Org_num: 43129
All begin HVZ13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19660 | endoribonuclease SymE | |||
| 19665 | S | S.Ecos15955ORF12100P (100% identity) | S.Eco33C12ORF19670P | |
| 19670 | M | M.Ecos15955ORF12100P (100% identity) | M.Eco33C12ORF19670P | |
| 19675 | R | Ecos15955ORF12100P (99% identity) | Eco33C12ORF19670P | |
| 19680 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1410 | TrmB family transcriptional regulator | |||
| 1415 | M | M.EcoSC407ORFFP (97% identity) | M.Eco33C12ORF1415P | |
| 1425 | tellurite resistance TerB family protein | |||
| 2905 | DUF977 family protein | |||
| 2910 | M | M.Sen58011ORF9805P (100% identity) | M.Eco33C12ORF2910P | |
| 2915 | ATP-binding protein | |||
| 6070 | drug/metabolite exporter YedA | |||
| 6075 | V | V.SsoSE61DcmP (100% identity) | V.Eco33C12DcmP | |
| 6080 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco33C12DcmP |
| 6085 | phosphohydrolase | |||
| 13635 | DNA-binding transcriptional regulator Fis | |||
| 13640 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco33C12ORF13640P |
| 13645 | DUF2556 family protein | |||
| 14260 | ribulose-phosphate 3-epimerase | |||
| 14265 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco33C12DamP |
| 14270 | cell division protein DamX | |||
| 17685 | PerC family transcriptional regulator | |||
| 17690 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco33C12ORF17690P |
| 17695 | LexA family transcriptional regulator | |||
| 18510 | transposase | |||
| 18515 | M | M.Eco45S0C06ORF4705P (100% identity) | M.Eco33C12ORF18515P | |
| 18520 | ATP-binding protein | |||
| plasmid pRHB33-C12_2 | ||||
| 24850 | 103 aa hypothetical protein | |||
| 24855 | M | M.Eco45S0C06ORF24735P (99% identity) | M.Eco33C12ORF24855P | |
| 24860 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19675 | type I restriction-modification system | |||
| 19680 | R | Ssp28760MrrP (100% identity) | Eco33C12MrrP | |
| 19685 | GTPase | |||