Escherichia coli RHB32-C15 |
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Putative Escherichia coli RHB32-C15 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,999,806 bp | CP057234 |
| plasmid pRHB32-C15_2: | 145,678 bp | CP057235 |
| plasmid pRHB32-C15_4: | 5,513 bp | CP057237 |
REBASE acronym: Eco32C15
Org_num: 43123
All begin HVZ02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11585 | restriction endonuclease | |||
| 11590 | M | M.Eco38C15ORF12050P (100% identity) | M.Eco32C15ORF11590P | |
| ??? | S | S.Eco936ORF20280P (100% identity) | S.Eco32C15ORF11590P | |
| 11600 | R | Eco18C12ORF19140P (100% identity) | Eco32C15ORF11590P | |
| 11605 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1000 | phosphohydrolase | |||
| 1005 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco32C15DcmP |
| 1010 | V | V.EcoZYB62DcmP (100% identity) | V.Eco32C15DcmP | |
| 1015 | drug/metabolite exporter YedA | |||
| 11790 | HNH endonuclease | |||
| 11795 | R | Eco14C07ORF10935P (100% identity) | Eco32C15ORF11795P | |
| 11800 | 332 aa hypothetical protein | |||
| 16700 | cell division protein DamX | |||
| 16705 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco32C15DamP |
| 16710 | ribulose-phosphate 3-epimerase | |||
| 17255 | DUF2556 family protein | |||
| 17260 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco32C15ORF17260P |
| 17265 | DNA-binding transcriptional regulator Fis | |||
| 20455 | adhesin-like autotransporter YpjA/EhaD | |||
| 20460 | R | Sens24184ORF5380P (100% identity) | C | Eco32C15ORF20460P |
| 20465 | DNA primase | |||
| 20600 | 67 aa hypothetical protein | |||
| 20605 | M | M.Sso63633ORF22290P (100% identity) | M.Eco32C15ORF20605P | |
| 20610 | phage lysis protein EssD | |||
| plasmid pRHB32-C15_2 | ||||
| 24270 | 73 aa hypothetical protein | |||
| 24275 | M | M.Sen4346ORF22715P (100% identity) | M.Eco32C15ORF24275P | |
| 24280 | 89 aa hypothetical protein | |||
| plasmid pRHB32-C15_4 | ||||
| 24660 | Rop family plasmid primer RNA-binding protein | |||
| 24665 | R | KpnDJORFGP (95% identity) | CCNGG | Eco32C15ORF24635P |
| 24635 | M | M.Efe33C07ORF24345P (100% identity) | CCNGG | M.Eco32C15ORF24635P |