Escherichia fergusonii RHB33-C04 |
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Putative Escherichia fergusonii RHB33-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,729,689 bp | CP057215 |
| plasmid pRHB33-C04_2: | 160,081 bp | CP057216 |
| plasmid pRHB33-C04_3: | 104,967 bp | CP057217 |
| plasmid pRHB33-C04_4: | 5,570 bp | CP057218 |
| plasmid pRHB33-C04_5: | 4,286 bp | CP057219 |
REBASE acronym: Efe33C04
Org_num: 43217
All begin HVZ08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19485 | restriction endonuclease | |||
| 19490 | M | M.Efe65411ORF19250P (100% identity) | M.Efe33C04ORF19490P | |
| 19495 | restriction endonuclease subunit S | |||
| 19500 | IS1 family transposase | |||
| 19505 | restriction endonuclease subunit S | |||
| 19510 | R | Efe33C07ORF19490P (100% identity) | Efe33C04ORF19490P | |
| 19515 | S | S.Efe33C07ORF19490P (100% identity) | S.Efe33C04ORF19490P | |
| 19520 | N-6 DNA methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1315 | bifunctional isocitrate dehydrogenase | |||
| 1320 | M | M.EfeC18ORF680P (100% identity) | M.Efe33C04ORF1320P | |
| 1325 | glyoxylate bypass operon transcriptional | |||
| 5205 | 71 aa hypothetical protein | |||
| 5210 | M | M.Sen21974ORF23385P (100% identity) | M.Efe33C04ORF5210P | |
| 5215 | 145 aa hypothetical protein | |||
| 17110 | DUF1317 family protein | |||
| 17115 | M | M.Sbo812ORFAP (100% identity) | M.Efe33C04ORF17115P | |
| 17120 | 93 aa hypothetical protein | |||
| 20295 | DNA-binding transcriptional regulator Fis | |||
| 20300 | M | M.Efe33C07ORF20300P (100% identity) | M.Efe33C04ORF20300P | |
| 20305 | DUF2556 family protein | |||
| 20820 | ribulose-phosphate 3-epimerase | |||
| 20825 | M | M.EfeTDamP (100% identity) | M.Efe33C04DamP | |
| 20830 | cell division protein DamX | |||
| plasmid pRHB33-C04_2 | ||||
| 23410 | 89 aa hypothetical protein | |||
| 23415 | M | M.Sen4346ORF22715P (100% identity) | M.Efe33C04ORF23415P | |
| 23420 | 73 aa hypothetical protein | |||
| plasmid pRHB33-C04_3 | ||||
| 23970 | 103 aa hypothetical protein | |||
| 23975 | M | M.Efe42C24ORF22300P (100% identity) | SAY | M.Efe33C04ORF23975P |
| 23980 | 73 aa hypothetical protein | |||
| plasmid pRHB33-C04_4 | ||||
| 24360 | MbeD family mobilization/exclusion protein | |||
| 24365 | M | M.Efe33C07ORF24345P (100% identity) | CCNGG | M.Efe33C04ORF24365P |
| 24370 | R | KpnDJORFGP (95% identity) | CCNGG | Efe33C04ORF24365P |
| plasmid pRHB33-C04_5 | ||||
| 24380 | Rop family plasmid primer RNA-binding protein | |||
| 24385 | M | M.Efe33C07ORF24365P (100% identity) | M.Efe33C04ORF24385P | |
| 24390 | R | Efe33C07ORF24365P (100% identity) | Efe33C04ORF24385P | |