Escherichia coli RHB34-C16 |
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Putative Escherichia coli RHB34-C16 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,935,063 bp
GenBank #: CP057166
REBASE acronym: Eco34C16
Org_num: 43141
All begin HVZ27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11730 | 322 aa hypothetical protein | |||
| 11735 | R | SspS13ORF3945P (100% identity) | Eco34C16ORF11740P | |
| 11740 | M | M.EcoRM9088ORF13950P (100% identity) | M.Eco34C16ORF11740P | |
| 11745 | S | S.Eco25C19ORF12035P (100% identity) | S.Eco34C16ORF11740P | |
| 11750 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 685 | phosphohydrolase | |||
| 690 | M | M.Eco31C18DcmP (100% identity) | CCWGG | M.Eco34C16DcmP |
| 695 | V | V.SsoSE61DcmP (100% identity) | V.Eco34C16DcmP | |
| 700 | drug/metabolite exporter YedA | |||
| 5075 | RusA family crossover junction | |||
| 5080 | M | M.Cfr862ORF8500P (58% identity) | M.Eco34C16ORF5080P | |
| 5085 | DUF2303 family protein | |||
| 8365 | NinE family protein | |||
| 8370 | M | M.SflFF36ORF6645P (100% identity) | GATC | M.Eco34C16ORF8370P |
| 8375 | recombination protein NinB | |||
| 11940 | HNH endonuclease | |||
| 11945 | R | SflFF17ORF19275P (100% identity) | Eco34C16ORF11945P | |
| 11950 | 59 aa hypothetical protein | |||
| 17005 | cell division protein DamX | |||
| 17010 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco34C16DamP |
| 17015 | ribulose-phosphate 3-epimerase | |||
| 17520 | DUF2556 family protein | |||
| 17525 | M | M.Eco25C19ORF18090P (100% identity) | ATGCAT | M.Eco34C16ORF17525P |
| 17530 | DNA-binding transcriptional regulator Fis | |||
| 19605 | helix-turn-helix transcriptional regulator | |||
| 19610 | R | EcoC09ORF10175P (100% identity) | GCWGC | Eco34C16ORF19610P |
| 19615 | 536 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 120 | tail fiber assembly protein | |||
| 125 | R | Eco730V1ORF8910P (100% identity) | Eco34C16ORF125P | |
| 130 | 604 aa hypothetical protein | |||