Escherichia coli RHB34-C18 |
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Putative Escherichia coli RHB34-C18 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,845,942 bp | CP057163 |
| plasmid pRHB34-C18_2: | 97,952 bp | CP057164 |
REBASE acronym: Eco34C18
Org_num: 43142
All begin HVZ28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5285 | GTPase family protein | |||
| 5290 | M | M.EcoNT1F25ORFBP (93% identity) | M.Eco34C18ORF5290P | |
| 5295 | S | S.EcoNT1F25ORFBP (100% identity) | S.Eco34C18ORF5290P | |
| 5300 | R | Eco819ORF3430P (100% identity) | Eco34C18ORF5290P | |
| 5305 | transposase domain-containing protein | |||
| 9270 | 388 aa hypothetical protein | |||
| 9275 | M | M.EcoF5505I (100% identity) | ACAGNNNNNNTGC | M.Eco34C18ORF9275P |
| 9280 | S | S.EcoF5505I (100% identity) | ACAGNNNNNNTGC | S.Eco34C18ORF9275P |
| 9285 | YecA family protein | |||
| 9290 | cold shock domain-containing protein | |||
| 9295 | R | EcoE1441ORF1991P (100% identity) | ACAGNNNNNNTGC | Eco34C18ORF9275P |
| 9300 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1630 | cell division protein DamX | |||
| 1635 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco34C18DamP |
| 1640 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco34C18ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 8960 | phosphohydrolase | |||
| 8965 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco34C18DcmP |
| 8970 | V | V.SsoSE61DcmP (100% identity) | V.Eco34C18DcmP | |
| 8975 | drug/metabolite exporter YedA | |||
| plasmid pRHB34-C18_2 | ||||
| 23205 | 103 aa hypothetical protein | |||
| 23210 | M | M.Sen1045ORF24220P (100% identity) | M.Eco34C18ORF23210P | |
| 23215 | 73 aa hypothetical protein | |||