Escherichia coli RHB35-C09 |
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Putative Escherichia coli RHB35-C09 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,094,411 bp | CP057154 |
| plasmid pRHB35-C09_3: | 92,401 bp | CP057156 |
REBASE acronym: Eco35C09
Org_num: 43145
All begin HVZ33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15175 | 58 aa hypothetical protein | |||
| 15180 | M | M.EcoW14588ORF21505P (100% identity) | YTCANNNNNNGTNG | M.Eco35C09ORF15180P |
| 15185 | S | S1.EcoW14588ORF21505P (99% identity) | YTCANNNNNNGTNG | S.Eco35C09ORF15180P |
| 15190 | DUF4433 domain-containing protein | |||
| 15195 | macro domain-containing protein | |||
| 15200 | R | EcoUM1886ORF17525P (100% identity) | YTCANNNNNNGTNG | Eco35C09ORF15180P |
| 15205 | M48 family metallopeptidase | |||
| 21245 | 322 aa hypothetical protein | |||
| 21250 | R | Sbo192ORF9605P (100% identity) | Eco35C09ORF21255P | |
| 21255 | M | M.EcoRM9088ORF13950P (100% identity) | M.Eco35C09ORF21255P | |
| 21260 | S | S.EcoEC507ORF5530P (99% identity) | S.Eco35C09ORF21255P | |
| 21265 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1630 | cell division protein DamX | |||
| 1635 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco35C09DamP |
| 1640 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco35C09ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 6450 | serine/threonine protein phosphatase | |||
| 6455 | M | M.EcoWP4ORF12630P (97% identity) | M.Eco35C09ORF6455P | |
| 6460 | PerC family transcriptional regulator | |||
| 7400 | cell division protein ZapA | |||
| 7405 | M | M.Sbo812ORFAP (98% identity) | M.Eco35C09ORF7405P | |
| 7410 | DUF1317 family protein | |||
| 9850 | phosphohydrolase | |||
| 9855 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco35C09DcmP |
| 9860 | V | V.SsoSE61DcmP (100% identity) | V.Eco35C09DcmP | |
| 9865 | drug/metabolite exporter YedA | |||
| 19075 | tellurite/colicin resistance protein | |||
| 19095 | M | M.EcoG089ORF1610P (100% identity) | M.Eco35C09ORF19095P | |
| 19100 | 67 aa hypothetical protein | |||
| 20915 | tellurite resistance protein | |||
| 20935 | M | M.EcoRM9088ORF13610P (99% identity) | M.Eco35C09ORF20935P | |
| 20940 | TrmB family transcriptional regulator | |||
| 21735 | osmoprotectant transport activator ProQ | |||
| 21740 | M | M.SflFF24DndBP (100% identity) | M.Eco35C09DndBP | |
| 21745 | DNA phosphorothioation system sulfurtransferase | |||
| 21740 | DNA sulfur modification protein DndB | |||
| 21745 | M | M.SflFF24DndCP (100% identity) | M.Eco35C09DndCP | |
| 21750 | DNA sulfur modification protein DndD | |||
| 21745 | DNA phosphorothioation system sulfurtransferase | |||
| 21750 | M | M.SflFF24DndDP (100% identity) | M.Eco35C09DndDP | |
| 21755 | DNA sulfur modification protein DndE | |||
| 21750 | DNA sulfur modification protein DndD | |||
| 21755 | M | M.SflFF24DndEP (100% identity) | M.Eco35C09DndEP | |
| 21760 | DGQHR domain-containing protein | |||
| 21770 | accessory gene regulator B family protein | |||
| 21775 | R | EcosEC5DptHP (100% identity) | Eco35C09DptHP | |
| 21780 | DNA phosphorothioation-dependent restriction | |||
| 21775 | DNA phosphorothioation-dependent restriction | |||
| 21780 | R | SflFF24DptGP (100% identity) | Eco35C09DptGP | |
| 21785 | DNA phosphorothioation-dependent restriction | |||
| 21780 | DNA phosphorothioation-dependent restriction | |||
| 21785 | R | SflFF24DptFP (99% identity) | Eco35C09DptFP | |
| 21790 | porin family protein | |||
| plasmid pRHB35-C09_3 | ||||
| 25820 | 103 aa hypothetical protein | |||
| 25825 | M | M.EspP079ORF5553P (100% identity) | SAY | M.Eco35C09ORF25825P |
| 25830 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21265 | endoribonuclease SymE | |||
| 21270 | R | Eco55B1GmrSDP (99% identity) | Eco35C09GmrSDP | |
| 21275 | DUF1127 domain-containing protein | |||