Escherichia coli RHB35-C14 |
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Putative Escherichia coli RHB35-C14 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,885,384 bp | CP057152 |
| plasmid pRHB35-C14_2: | 133,928 bp | CP057153 |
REBASE acronym: Eco35C14
Org_num: 43146
All begin HVZ36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5720 | IS1 family transposase | |||
| 5725 | R | Ror24150ORF17255P (99% identity) | GGANNNNNCTC | Eco35C14ORF5735P |
| 5730 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Eco35C14ORF5735P |
| 5735 | M | M.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | M.Eco35C14ORF5735P |
| 5740 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1675 | cell division protein DamX | |||
| 1680 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco35C14DamP |
| 1685 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco35C14ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 3760 | 5-nucleotidase | |||
| 3765 | R | EcoR3ORF16890P (98% identity) | Eco35C14ORF3765P | |
| 3770 | integrase | |||
| 9325 | phosphohydrolase | |||
| 9330 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco35C14DcmP |
| 9335 | V | V.SsoSE61DcmP (100% identity) | V.Eco35C14DcmP | |
| 9340 | drug/metabolite exporter YedA | |||
| 15645 | 70 aa hypothetical protein | |||
| 15650 | M | M.Cfr589ORF19760P (99% identity) | M.Eco35C14ORF15650P | |
| 15655 | DUF3850 domain-containing protein | |||
| 20265 | holin | |||
| 20280 | M | M.EcotcmA3ORF4330P (92% identity) | M.Eco35C14ORF20280P | |
| 20285 | 67 aa hypothetical protein | |||
| 20740 | sialate O-acetylesterase | |||
| 20745 | R | EcosB2CORFAP (100% identity) | Eco35C14ORF20745P | |
| 20750 | AAA family ATPase | |||
| plasmid pRHB35-C14_2 | ||||
| 24205 | 101 aa hypothetical protein | |||
| 24210 | M | M.Eal7ORF25780P (99% identity) | M.Eco35C14ORF24210P | |
| 24215 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20745 | HNH endonuclease | |||
| 20750 | R | Eco40C03McrBP (100% identity) | Eco35C14McrBP | |
| 20755 | R | EcoWMcrCP (34% identity) | Eco35C14McrCP | |
| 20760 | integrase | |||