Escherichia coli RHB36-C16 |
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Putative Escherichia coli RHB36-C16 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,842,908 bp | CP057126 |
| plasmid pRHB36-C16_2: | 109,591 bp | CP057127 |
| plasmid pRHB36-C16_3: | 90,031 bp | CP057128 |
REBASE acronym: Eco36C16
Org_num: 43153
All begin HVZ51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1985 | NADPH-dependent aldehyde reductase Ahr | |||
| 1995 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | Eco36C16ORF2005P |
| 2000 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.Eco36C16ORF2005P |
| 2005 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.Eco36C16ORF2005P |
| 2010 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5280 | cell division protein ZapA | |||
| 5285 | M | M.Sbo812ORFAP (100% identity) | M.Eco36C16ORF5285P | |
| 5290 | DUF1317 family protein | |||
| 7070 | TraR/DksA family transcriptional regulator | |||
| 7075 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco36C16ORF7075P |
| 7080 | replication endonuclease | |||
| 8430 | phosphohydrolase | |||
| 8435 | M | M.Eco40C03DcmP (100% identity) | CCWGG | M.Eco36C16DcmP |
| 8440 | V | V.SsoSE61DcmP (100% identity) | V.Eco36C16DcmP | |
| 8445 | drug/metabolite exporter YedA | |||
| 10375 | DUF977 family protein | |||
| ??? | M | M.Ecoi029ORF11125P (100% identity) | M.Eco36C16ORF10380P | |
| 10385 | 60 aa hypothetical protein | |||
| 20115 | tyrosine-type recombinase/integrase | |||
| 20120 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco36C16ORF20120P |
| 20125 | DUF2556 family protein | |||
| 20670 | ribulose-phosphate 3-epimerase | |||
| 20675 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco36C16DamP |
| 20680 | cell division protein DamX | |||
| plasmid pRHB36-C16_3 | ||||
| 24530 | 73 aa hypothetical protein | |||
| 24535 | M | M.EcoXJ61ORF24590P (100% identity) | M.Eco36C16ORF24535P | |
| 24540 | 103 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB36-C16_2 | ||||
| 24060 | 76 aa hypothetical protein | |||
| 24065 | M | M.Sso524ORF460P (100% identity) | M.Eco36C16ORF24065P | |
| 24070 | 269 aa hypothetical protein | |||