Escherichia fergusonii RHB38-C07 |
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Putative Escherichia fergusonii RHB38-C07 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,730,551 bp | CP057093 |
| plasmid pRHB38-C07_2: | 106,378 bp | CP057094 |
REBASE acronym: Efe38C07
Org_num: 43221
All begin HVZ69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17545 | GTPase family protein | |||
| 17550 | M | M.SflFF35ORF18280P (65% identity) | M.Efe38C07ORF17550P | |
| 17555 | IS1 family transposase | |||
| 17645 | IS1 family transposase | |||
| 17650 | R | EfeC23ORF13600P (100% identity) | Efe38C07ORF17660P | |
| 17655 | S | S.Efe41C20ORF17415P (100% identity) | S.Efe38C07ORF17660P | |
| 17660 | M | M.Efe41C20ORF17415P (100% identity) | M.Efe38C07ORF17660P | |
| 17665 | IS1 family transposase | |||
| plasmid pRHB38-C07_2 | ||||
| 22990 | IS3 family transposase | |||
| 22995 | R | Efe41C20ORF22770P (100% identity) | Efe38C07ORF23010P | |
| 23000 | DUF4268 domain-containing protein | |||
| 23005 | S | S.Efe41C20ORF22770P (100% identity) | S.Efe38C07ORF23010P | |
| 23010 | M | M.Efe41C20ORF22770P (100% identity) | M.Efe38C07ORF23010P | |
| 23015 | SPFH/Band 7/PHB domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1375 | bifunctional isocitrate dehydrogenase | |||
| 1380 | M | M.Efe41C20ORF1365P (100% identity) | M.Efe38C07ORF1380P | |
| 1385 | glyoxylate bypass operon transcriptional | |||
| 1670 | PerC family transcriptional regulator | |||
| 1675 | M | M.Efe41C20ORF1660P (100% identity) | GATC | M.Efe38C07ORF1675P |
| 1680 | LexA family transcriptional regulator | |||
| 1710 | 67 aa hypothetical protein | |||
| 1715 | M | M.Sdy9764ORFEP (100% identity) | M.Efe38C07ORF1715P | |
| 1720 | phage lysis protein EssD | |||
| 6685 | DUF1382 family protein | |||
| 6690 | M | M.Efe41C20ORF6615P (100% identity) | M.Efe38C07ORF6690P | |
| 6695 | PerC family transcriptional regulator | |||
| 8930 | recombination protein NinB | |||
| 8935 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Efe38C07ORF8935P |
| 8940 | NinE family protein | |||
| 12905 | 150 aa hypothetical protein | |||
| 12910 | M | M.Efe41C20ORF12665P (100% identity) | M.Efe38C07ORF12910P | |
| 12915 | monooxygenase | |||
| 20155 | DNA-binding transcriptional regulator Fis | |||
| 20160 | M | M.Efe41C20ORF19910P (100% identity) | M.Efe38C07ORF20160P | |
| 20165 | DUF2556 family protein | |||
| 20680 | ribulose-phosphate 3-epimerase | |||
| 20685 | M | M.EfeTDamP (100% identity) | M.Efe38C07DamP | |
| 20690 | cell division protein DamX | |||
| plasmid pRHB38-C07_2 | ||||
| 23480 | 76 aa hypothetical protein | |||
| 23485 | M | M.SphSSU5ORF88P (96% identity) | M.Efe38C07ORF23485P | |
| 23490 | 290 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19490 | 100 aa hypothetical protein | |||
| 19495 | R | SflN116ORF19490P (98% identity) | Efe38C07ORF19500P | |
| 19500 | M | M.Efe41C20ORF19255P (81% identity) | M.Efe38C07ORF19500BP | |
| 19505 | IS4-like element ISVsa5 family transposase | |||
| 19510 | M | M.EcoSCU172ORF3240P (19% identity) | M.Efe38C07ORF19500AP | |
| 19515 | DEAD/DEAH box helicase family protein | |||