Escherichia coli RHB42-C16 |
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Putative Escherichia coli RHB42-C16 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,729,906 bp | CP056933 |
| plasmid pRHB42-C16_2: | 109,231 bp | CP056934 |
REBASE acronym: Eco42C16
Org_num: 43191
All begin HV021_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12035 | 212 aa hypothetical protein | |||
| 12040 | M | M.EcoSTEC384ORFFP (100% identity) | M.Eco42C16ORF12040P | |
| 12045 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1700 | cell division protein DamX | |||
| 1705 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco42C16DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.Eco42C16ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 8615 | phosphohydrolase | |||
| 8620 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco42C16DcmP |
| 8625 | V | V.SsoSE61DcmP (100% identity) | V.Eco42C16DcmP | |
| 8630 | drug/metabolite exporter YedA | |||
| 17725 | DUF262 domain-containing protein | |||
| 17730 | R | EcoSHP24ORF23700P (100% identity) | Eco42C16ORF17735P | |
| 17735 | M | M.EcoST131ORF16015P (100% identity) | M.Eco42C16ORF17735P | |
| 17740 | antitermination protein | |||
| 17760 | LexA family transcriptional regulator | |||
| 17765 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco42C16ORF17765P |
| 17770 | PerC family transcriptional regulator | |||
| 19690 | HNH endonuclease | |||
| 19695 | R | EcoSTEC384ORFHP (96% identity) | R1.Eco42C16ORF19700P | |
| 19700 | M | M.EcoXH993ORF23960P (100% identity) | M.Eco42C16ORF19700P | |
| 19705 | R | R2.EcoXH993ORF23960P (98% identity) | R2.Eco42C16ORF19700P | |
| 19710 | transposase | |||
| plasmid pRHB42-C16_2 | ||||
| 23040 | 73 aa hypothetical protein | |||
| 23045 | M | M.SflN92ORF24820P (100% identity) | M.Eco42C16ORF23045P | |
| 23050 | 101 aa hypothetical protein | |||