Escherichia coli RHB42-C20 |
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Putative Escherichia coli RHB42-C20 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,916,628 bp | CP056928 |
| plasmid pRHB42-C20_2: | 145,329 bp | CP056929 |
REBASE acronym: Eco42C20
Org_num: 43192
All begin HV022_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20815 | DUF4942 domain-containing protein | |||
| 20820 | M | M.EcoW26ORF3070P (100% identity) | M.Eco42C20ORF20820P | |
| 20825 | S | S.EcoW26ORF3070P (100% identity) | S.Eco42C20ORF20820P | |
| 20830 | R | SdyFF10ORF20075P (100% identity) | Eco42C20ORF20820P | |
| 20840 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco42C20DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2190 | DUF2556 family protein | |||
| 2195 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco42C20ORF2195P |
| 2200 | DNA-binding transcriptional regulator Fis | |||
| 8700 | TrmB family transcriptional regulator | |||
| 8705 | M | M.Eco42C20ORF9560P (99% identity) | M.Eco42C20ORF8705P | |
| 8715 | holin | |||
| 9010 | phosphohydrolase | |||
| 9015 | M | M.SflLIN6DcmP (99% identity) | CCWGG | M.Eco42C20DcmP |
| 9020 | V | V.SsoSE61DcmP (100% identity) | V.Eco42C20DcmP | |
| 9025 | drug/metabolite exporter YedA | |||
| 9555 | TrmB family transcriptional regulator | |||
| 9560 | M | M.Eco3208ORF9605P (100% identity) | M.Eco42C20ORF9560P | |
| 9570 | holin | |||
| 9705 | tail fiber assembly protein | |||
| 9710 | M | M.Eco3208ORF9685P (100% identity) | M.Eco42C20ORF9710P | |
| 9715 | R | Sso8033ORF3755P (100% identity) | Eco42C20ORF9710P | |
| 9720 | hydrolase | |||
| 14160 | phage lysis protein EssD | |||
| 14165 | M | M.Sso63633ORF22290P (100% identity) | M.Eco42C20ORF18635P | |
| 14170 | 67 aa hypothetical protein | |||
| 14200 | LexA family transcriptional regulator | |||
| 14205 | M | M.Eco24C21ORF7120P (100% identity) | GATC | M.Eco42C20ORF14205P |
| 14210 | PerC family transcriptional regulator | |||
| 18670 | LexA family transcriptional regulator | |||
| 18675 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.Eco42C20ORF18675P |
| 18680 | PerC family transcriptional regulator | |||
| 20790 | HNH endonuclease | |||
| 20795 | R | SdyFF10ORF20055P (99% identity) | Eco42C20ORF20795P | |
| 20800 | McrC family protein | |||
| plasmid pRHB42-C20_2 | ||||
| 24385 | 73 aa hypothetical protein | |||
| 24390 | M | M.Sen4346ORF22715P (100% identity) | M.Eco42C20ORF24390P | |
| 24395 | 89 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20795 | HNH endonuclease | |||
| 20800 | R | SdyFF10McrCP (100% identity) | Eco42C20McrCP | |
| 20805 | R | SflSTLE4McrBP (99% identity) | Eco42C20McrBP | |
| 20810 | IS3-like element IS3 family transposase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10225 | 3-5 exoribonuclease | |||
| 10230 | M | M.EcoT34ORF2715P (100% identity) | M.Eco42C20ORF10230P | |
| 10235 | 134 aa hypothetical protein | |||