Escherichia coli RHB42-C22 |
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Putative Escherichia coli RHB42-C22 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,882,757 bp | CP056921 |
| plasmid pRHB42-C22_2: | 92,192 bp | CP056922 |
REBASE acronym: Eco42C22
Org_num: 43193
All begin HV023_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11475 | adenine/cytosine-specific restriction | |||
| 11480 | R | Eco40C21ORF20130P (100% identity) | Eco42C22ORF11485P | |
| 11485 | M | M.Eco29C22ORF11835P (100% identity) | M.Eco42C22ORF11485P | |
| ??? | S | S.Eco29C22ORF11835P (100% identity) | S.Eco42C22ORF11485P | |
| 11495 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1040 | TrmB family transcriptional regulator | |||
| 1045 | M | M.Eco32C18ORF935P (100% identity) | M.Eco42C22ORF1045P | |
| 1055 | holin | |||
| 1245 | phosphohydrolase | |||
| 1250 | M | M.Eco29C22DcmP (100% identity) | CCWGG | M.Eco42C22DcmP |
| 1255 | V | V.Ecostr9DcmP (74% identity) | V.Eco42C22DcmP | |
| 1260 | drug/metabolite exporter YedA | |||
| 11280 | LexA family transcriptional regulator | |||
| 11285 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco42C22ORF11285P |
| 11290 | PerC family transcriptional regulator | |||
| 11700 | HNH endonuclease | |||
| 11705 | R | Ecoi362ORF3874P (100% identity) | Eco42C22ORF11705P | |
| 11710 | 59 aa hypothetical protein | |||
| 16680 | cell division protein DamX | |||
| 16685 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco42C22DamP |
| 16690 | ribulose-phosphate 3-epimerase | |||
| 17235 | DUF2556 family protein | |||
| 17240 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco42C22ORF17240P |
| 17245 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB42-C22_2 | ||||
| 23585 | 101 aa hypothetical protein | |||
| 23590 | M | M.Eco23C24ORF23675P (100% identity) | M.Eco42C22ORF23590P | |
| 23595 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11470 | GTPase | |||
| 11475 | R | Ssp28760MrrP (100% identity) | Eco42C22MrrP | |
| 11480 | type I restriction-modification system | |||
| 11495 | endoribonuclease SymE | |||
| 11500 | R | Eco29C22McrBP (100% identity) | Eco42C22McrBP | |
| 11505 | R | Eco29C22McrCP (100% identity) | Eco42C22McrCP | |