|
Putative Escherichia coli RHBSTW-00081 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,242,468 bp | CP056873 |
plasmid pRHBSTW-00081_2: | 92,934 bp | CP056874 |
plasmid pRHBSTW-00081_3: | 75,466 bp | CP056875 |
REBASE acronym: EcoW081
Org_num: 43199
All begin HV057_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
13495 | type II toxin-antitoxin system RelB/DinJ family | |||
13500 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoW081ORF13500P |
13505 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoW081ORF13500P |
13510 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoW081ORF13500P |
13515 | 184 aa hypothetical protein | |||
18025 | endoribonuclease SymE | |||
18030 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoW081ORF18040P |
18035 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoW081ORF18040P |
18040 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoW081ORF18040P |
18045 | restriction endonuclease | |||
19845 | ash family protein | |||
19850 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoW081ORF19855P |
19855 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoW081ORF19855P |
19860 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoW081ORF19855P |
19865 | type IV toxin-antitoxin system AbiEi family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2870 | DUF262 domain-containing protein | |||
2875 | R | R2.EcosS3ORF2905P (100% identity) | EcoW081ORF2880P | |
2880 | M | M2.EcosS3ORF2905P (100% identity) | M.EcoW081ORF2880P | |
2885 | antitermination protein | |||
3740 | drug/metabolite exporter YedA | |||
3745 | V | V.SflC32DcmP (74% identity) | V.EcoW081DcmP | |
3750 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoW081DcmP |
3755 | phosphohydrolase | |||
7180 | PerC family transcriptional regulator | |||
7185 | M | M.EcoW082ORF7200P (100% identity) | M.EcoW081ORF7185P | |
7190 | DUF1382 family protein | |||
11410 | DNA-binding transcriptional regulator Fis | |||
11415 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoW081ORF11415P |
11420 | DUF2556 family protein | |||
12010 | ribulose-phosphate 3-epimerase | |||
12015 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW081DamP |
12020 | cell division protein DamX | |||
16670 | conjugal transfer protein TraG N-terminal | |||
16675 | M | M.EcosS3ORF15775P (100% identity) | M.EcoW081ORF16675P | |
16680 | R | EcosS3ORF15775P (100% identity) | EcoW081ORF16675P | |
16685 | 555 aa hypothetical protein | |||
23320 | 71 aa hypothetical protein | |||
23325 | M | M.KpnYN1ORFGP (89% identity) | M.EcoW081ORF23325P | |
23330 | helix-turn-helix transcriptional regulator | |||
25570 | TrmB family transcriptional regulator | |||
25575 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoW081ORF25575P |
25590 | DUF3927 family protein | |||
plasmid pRHBSTW-00081_2 | ||||
26085 | 73 aa hypothetical protein | |||
26090 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoW081ORF26090P | |
26095 | 102 aa hypothetical protein | |||
plasmid pRHBSTW-00081_3 | ||||
26300 | 103 aa hypothetical protein | |||
26305 | M | M.EcoW082ORF26335P (100% identity) | M.EcoW081ORF26305P | |
26310 | 73 aa hypothetical protein |