Escherichia coli RHBSTW-00122 |
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Putative Escherichia coli RHBSTW-00122 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,725,467 bp | CP056846 |
| plasmid pRHBSTW-00122_2: | 151,959 bp | CP056847 |
REBASE acronym: EcoW122
Org_num: 43203
All begin HV080_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19395 | 322 aa hypothetical protein | |||
| 19400 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoW122ORF19405P |
| 19405 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoW122ORF19405P |
| 19410 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoW122ORF19405P |
| 19415 | endoribonuclease SymE | |||
| plasmid pRHBSTW-00122_2 | ||||
| 22995 | chromosome segregation protein SMC | |||
| 23000 | M | M.SenS1545ORF24780P (100% identity) | M.EcoW122ORF23000P | |
| 23005 | R | SenS1545ORF24780P (100% identity) | EcoW122ORF23000P | |
| 23010 | ANR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1675 | cell division protein DamX | |||
| 1680 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoW122DamP |
| 1685 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.EcoW122ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 9030 | phosphohydrolase | |||
| 9035 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.EcoW122DcmP |
| 9040 | V | V.SsoSE61DcmP (100% identity) | V.EcoW122DcmP | |
| 9045 | drug/metabolite exporter YedA | |||
| 14750 | replication endonuclease | |||
| 14755 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoW122ORF14755P |
| 14760 | TraR/DksA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19415 | endoribonuclease SymE | |||
| ??? | R | EcoS21GmrDP (100% identity) | EcoW122GmrDP | |
| 19425 | R | SflN101GmrSP (100% identity) | EcoW122GmrSP | |
| 19430 | DUF1127 domain-containing protein | |||