Escherichia coli RHBSTW-00124 |
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Putative Escherichia coli RHBSTW-00124 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,558,474 bp | CP056842 |
| plasmid pRHBSTW-00124_2: | 111,550 bp | CP056843 |
| plasmid pRHBSTW-00124_3: | 87,144 bp | CP056844 |
| plasmid pRHBSTW-00124_4: | 46,419 bp | CP056845 |
REBASE acronym: Eco0124
Org_num: 43013
All begin HV082_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5270 | IS1 family transposase | |||
| 5275 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco0124ORF5285P |
| 5280 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco0124ORF5285P |
| 5285 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco0124ORF5285P |
| 5290 | transposase | |||
| 8960 | UPF0149 family protein | |||
| 8965 | R | EcoM9ORF9685P (100% identity) | Eco0124ORF8965P | |
| 8970 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1625 | cell division protein DamX | |||
| 1630 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0124DamP |
| 1635 | ribulose-phosphate 3-epimerase | |||
| 2225 | DUF2556 family protein | |||
| 2230 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco0124ORF2230P |
| 2235 | DNA-binding transcriptional regulator Fis | |||
| 5310 | tyrosine-type recombinase/integrase | |||
| 5315 | M | M.Ecoi64ORF2425P (100% identity) | M.Eco0124ORF5315P | |
| 5320 | AAA family ATPase | |||
| 8685 | phosphohydrolase | |||
| 8690 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco0124DcmP |
| 8695 | V | V.SsoSE61DcmP (100% identity) | V.Eco0124DcmP | |
| 8700 | drug/metabolite exporter YedA | |||
| 14200 | replication endonuclease | |||
| 14205 | M | M.EcosBORF4330P (100% identity) | M.Eco0124ORF14205P | |
| 14210 | TraR/DksA family transcriptional regulator | |||
| plasmid pRHBSTW-00124_2 | ||||
| 22135 | 103 aa hypothetical protein | |||
| 22140 | M | M.Sso128ORF27515P (100% identity) | SAY | M.Eco0124ORF22140P |
| 22145 | 73 aa hypothetical protein | |||
| plasmid pRHBSTW-00124_3 | ||||
| 22575 | 103 aa hypothetical protein | |||
| 22580 | M | M.SflP099ORF24190P (100% identity) | M.Eco0124ORF22580P | |
| 22585 | 73 aa hypothetical protein | |||
| plasmid pRHBSTW-00124_4 | ||||
| 23045 | 75 aa hypothetical protein | |||
| 23050 | M | M.EcoPnTigORFFP (95% identity) | M.Eco0124ORF23050P | |
| 23055 | 90 aa hypothetical protein | |||