Escherichia coli RHBSTW-00687 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHBSTW-00687 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,788,290 bp | CP056348 |
| plasmid pRHBSTW-00687_2: | 83,612 bp | CP056349 |
REBASE acronym: Eco0687
Org_num: 43030
All begin HV267_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20025 | DUF4942 domain-containing protein | |||
| 20030 | M | M.EcoW26ORF3070P (100% identity) | M.Eco0687ORF20030P | |
| 20035 | S | S.EcoW26ORF3070P (100% identity) | S.Eco0687ORF20030P | |
| 20040 | R | SdyFF10ORF20075P (100% identity) | Eco0687ORF20030P | |
| 20050 | NADPH-dependent aldehyde reductase Ahr | |||
| 21140 | YjcB family protein | |||
| 21145 | R | EcotcmA3ORF16550P (100% identity) | Eco0687ORF21165P | |
| 21150 | DNA-processing protein DprA | |||
| 21155 | RecQ family ATP-dependent DNA helicase | |||
| 21160 | S | S.Pre393ORF2750P (100% identity) | S.Eco0687ORF21165P | |
| 21165 | M | M.Pre393ORF2750P (100% identity) | M.Eco0687ORF21165P | |
| 21170 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1700 | cell division protein DamX | |||
| 1705 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0687DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco0687ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 8750 | phosphohydrolase | |||
| 8755 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco0687DcmP |
| 8760 | V | V.SflFF64DcmP (100% identity) | V.Eco0687DcmP | |
| 8765 | drug/metabolite exporter YedA | |||
| 9690 | 3-5 exoribonuclease | |||
| 9695 | M | M1.Eco40ECORF9995P (99% identity) | M1.Eco0687ORF9695P | |
| 9700 | 66 aa hypothetical protein | |||
| 9705 | 109 aa hypothetical protein | |||
| 9710 | M | M2.Eco40ECORF9995P (100% identity) | M2.Eco0687ORF9695P | |
| 9715 | replication endonuclease | |||
| 10920 | DUF977 family protein | |||
| ??? | M | M.Ecoi029ORF11125P (100% identity) | M.Eco0687ORF10925P | |
| 10930 | 95 aa hypothetical protein | |||
| 15245 | protein ninD | |||
| 15250 | M | M.EcoT43ORF7510P (100% identity) | M.Eco0687ORF15250P | |
| 15255 | recombination protein NinB | |||
| 17805 | 76 aa hypothetical protein | |||
| 17810 | M | M.Sen38ORF10355P (99% identity) | M.Eco0687ORF11005P | |
| 17815 | TrmB family transcriptional regulator | |||
| plasmid pRHBSTW-00687_2 | ||||
| 23115 | 103 aa hypothetical protein | |||
| 23120 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco0687ORF23120P |
| 23125 | 73 aa hypothetical protein | |||