Escherichia coli RHBSTW-00646 |
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Putative Escherichia coli RHBSTW-00646 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,133,694 bp | CP056370 |
| plasmid pRHBSTW-00646_2: | 118,132 bp | CP056371 |
REBASE acronym: Eco0646
Org_num: 43028
All begin HV255_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20380 | DUF262 domain-containing protein | |||
| 20385 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | Eco0646ORF20390P |
| 20390 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.Eco0646ORF20390P |
| 20395 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.Eco0646ORF20390P |
| 20400 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0646DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2375 | DUF2556 family protein | |||
| 2380 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco0646ORF2380P |
| 2385 | DNA-binding transcriptional regulator Fis | |||
| 9535 | phosphohydrolase | |||
| 9540 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco0646DcmP |
| 9545 | V | V.EcosC25DcmP (100% identity) | V.Eco0646DcmP | |
| 9550 | drug/metabolite exporter YedA | |||
| 20565 | HNH endonuclease | |||
| 20570 | R | EcoT073ORF21650P (100% identity) | Eco0646ORF20570P | |
| 20575 | 109 aa hypothetical protein | |||
| 20745 | BREX-1 system phosphatase PglZ type A | |||
| 20750 | RM | EcoSCU112ORF20670P (100% identity) | Eco0646ORF20750P | |
| 20755 | BREX system P-loop protein BrxC | |||
| 21725 | 527 aa hypothetical protein | |||
| 21730 | R | EcosS3ORF15775P (100% identity) | Eco0646ORF21735P | |
| 21735 | M | M.EcosS3ORF15775P (100% identity) | M.Eco0646ORF21735P | |
| 21740 | conjugal transfer protein TraG N-terminal | |||
| plasmid pRHBSTW-00646_2 | ||||
| 24980 | 73 aa hypothetical protein | |||
| 24985 | M | M.Sfl2142ORF380P (100% identity) | M.Eco0646ORF24985P | |
| 24990 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20610 | ATP-binding domain-containing protein | |||
| 20615 | M | M.EcoUTI89I (100% identity) | CACAG | M.Eco0646ORF20615P |
| 20620 | R | EcoUTI89IP (100% identity) | CACAG | Eco0646ORF20615P |
| 20625 | integrase arm-type DNA-binding domain-containing | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13420 | NinE family protein | |||
| 13425 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco0646ORF13425P |
| 13430 | recombination protein NinB | |||