Escherichia coli RHBSTW-00343 |
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Putative Escherichia coli RHBSTW-00343 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,131,043 bp
GenBank #: CP056594
REBASE acronym: Eco343
Org_num: 43023
All begin HV168_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11980 | DUF4942 domain-containing protein | |||
| 11985 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.Eco343ORF11985P |
| 11990 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.Eco343ORF11985P |
| 11995 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | Eco343ORF11985P |
| 12000 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 745 | phosphohydrolase | |||
| 750 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.Eco343DcmP |
| 755 | V | V.EcosPA11DcmP (100% identity) | V.Eco343DcmP | |
| 760 | drug/metabolite exporter YedA | |||
| 13340 | phage holin, lambda family | |||
| 13345 | M | M.EfeC23ORF5790P (100% identity) | M.Eco343ORF13345P | |
| 13350 | TrmB family transcriptional regulator | |||
| 13375 | LexA family transcriptional regulator | |||
| 13380 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco343ORF13380P |
| 13385 | PerC family transcriptional regulator | |||
| 17045 | cell division protein DamX | |||
| 17050 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco343DamP |
| 17055 | ribulose-phosphate 3-epimerase | |||
| 17600 | DUF2556 family protein | |||
| 17605 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco343ORF17605P |
| 17610 | DNA-binding transcriptional regulator Fis | |||
| 22195 | DUF1382 family protein | |||
| 22200 | M | M.EcoWP4ORF12630P (97% identity) | M.Eco343ORF22200P | |
| 22205 | PerC family transcriptional regulator | |||