Escherichia coli RHBSTW-00321 |
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Putative Escherichia coli RHBSTW-00321 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,114,578 bp | CP056604 |
| plasmid pRHBSTW-00321_3: | 108,784 bp | CP056606 |
| plasmid pRHBSTW-00321_4: | 87,886 bp | CP056607 |
REBASE acronym: Eco0321
Org_num: 42810
All begin HV159_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12535 | DUF262 domain-containing protein | |||
| 12540 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco0321ORF12545P |
| 12545 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.Eco0321ORF12545P |
| 12550 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.Eco0321ORF12545P |
| 12555 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1055 | phosphohydrolase | |||
| 1060 | M | M.SflN116DcmP (100% identity) | CCWGG | M.Eco0321DcmP |
| 1065 | V | V.SflN116DcmP (100% identity) | V.Eco0321DcmP | |
| 1070 | drug/metabolite exporter YedA | |||
| 5485 | DUF3927 family protein | |||
| 5500 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco0321ORF5500P |
| 5505 | TrmB family transcriptional regulator | |||
| 12305 | phage holin, lambda family | |||
| 12310 | M | M.SflSTLE1ORF5465P (99% identity) | M.Eco0321ORF12310P | |
| 12315 | 67 aa hypothetical protein | |||
| 12340 | LexA family transcriptional regulator | |||
| 12345 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.Eco0321ORF12345P |
| 12350 | PerC family transcriptional regulator | |||
| 18110 | cell division protein DamX | |||
| 18115 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0321DamP |
| 18120 | ribulose-phosphate 3-epimerase | |||
| 18665 | DUF2556 family protein | |||
| 18670 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco0321ORF18670P |
| 18675 | DNA-binding transcriptional regulator Fis | |||
| 24030 | conserved phage C-terminal domain-containing | |||
| 24035 | M | M.EcoNIH4ORF26475P (99% identity) | M.Eco0321ORF24035P | |
| 24040 | DNA cytosine methyltransferase | |||
| 24035 | phage N-6-adenine-methyltransferase | |||
| 24040 | M | M.EcoEc40ORF24265P (100% identity) | M.Eco0321ORF24040P | |
| 24045 | phage regulatory protein/antirepressor Ant | |||
| 24060 | TrmB family transcriptional regulator | |||
| 24065 | M | M.Ero52266ORF30350P (99% identity) | M.Eco0321ORF24065P | |
| 24070 | 100 aa hypothetical protein | |||
| plasmid pRHBSTW-00321_3 | ||||
| 25655 | 103 aa hypothetical protein | |||
| 25660 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.Eco0321ORF25660P |
| 25665 | 73 aa hypothetical protein | |||
| plasmid pRHBSTW-00321_4 | ||||
| 26150 | 103 aa hypothetical protein | |||
| 26155 | M | M.Sso866ORF27155P (100% identity) | M.Eco0321ORF26155P | |
| 26160 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13620 | S8 family peptidase | |||
| 13625 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco0321ORF13625P |
| 13630 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco0321ORF13625P |
| 13635 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12555 | endoribonuclease SymE | |||
| 12560 | R | EcoCase1GmrSDP (100% identity) | Eco0321GmrDP | |
| 12565 | DUF1127 domain-containing protein | |||