Escherichia coli RHBSTW-00386 |
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Putative Escherichia coli RHBSTW-00386 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,818,714 bp
GenBank #: CP056565
REBASE acronym: Eco0386
Org_num: 42815
All begin HV181_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19615 | adenine/cytosine-specific restriction | |||
| 19620 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco0386ORF19625P |
| 19625 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco0386ORF19625P |
| ??? | S | S.EcoU90ORF3805P (100% identity) | TGANNNNNNNNTGCT | S.Eco0386ORF19625P |
| 19635 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1630 | cell division protein DamX | |||
| 1635 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0386DamP |
| 1640 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco0386ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 7190 | recombination protein NinB | |||
| 7195 | M | M.EcoLR641ORF13390P (100% identity) | GATC | M.Eco0386ORF7195P |
| 7200 | NinE family protein | |||
| 9425 | phosphohydrolase | |||
| 9430 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco0386DcmP |
| 9435 | V | V.SflFF59DcmP (100% identity) | V.Eco0386DcmP | |
| 9440 | drug/metabolite exporter YedA | |||
| 11435 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco0386ORF11440P | |
| 11445 | 57 aa hypothetical protein | |||
| 11745 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco0386ORF11750P | |
| 11755 | 60 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19610 | GTPase | |||
| 19615 | R | Ssp28760MrrP (100% identity) | Eco0386MrrP | |
| 19620 | type I restriction-modification system | |||
| 19635 | endoribonuclease SymE | |||
| 19640 | R | Ssp28760McrBP (99% identity) | Eco0386McrBP | |
| 19645 | R | Ssp28760McrCP (100% identity) | Eco0386McrCP | |