Escherichia coli RHBSTW-00410 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHBSTW-00410 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,326,610 bp | CP056556 |
| plasmid pRHBSTW-00410_2: | 107,875 bp | CP056557 |
| plasmid pRHBSTW-00410_3: | 75,959 bp | CP056558 |
REBASE acronym: Eco0410
Org_num: 42816
All begin HV188_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9835 | 122 aa hypothetical protein | |||
| 9840 | R | EcoSCU478ORF3490P (99% identity) | Eco0410ORF9850P | |
| 9845 | S | S.EcoSCU478ORF3490P (70% identity) | S.Eco0410ORF9850P | |
| 9850 | M | M.EcoMIN12ORF5715P (100% identity) | M.Eco0410ORF9850P | |
| 9855 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | 318 aa hypothetical protein | |||
| 25 | M | M.EcoSCU109ORF25P (100% identity) | M.Eco0410ORF25P | |
| 30 | phage portal protein | |||
| 965 | PerC family transcriptional regulator | |||
| 970 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco0410ORF970P |
| 975 | LexA family transcriptional regulator | |||
| 2880 | BREX-1 system phosphatase PglZ type A | |||
| 2885 | RM | EcoFP2ORF70P (100% identity) | CRARCAG | Eco0410ORF2885P |
| 2890 | BREX system P-loop protein BrxC | |||
| 2905 | 332 aa hypothetical protein | |||
| 2910 | R | Ecostr10ORF18645P (100% identity) | Eco0410ORF2910P | |
| 2915 | HNH endonuclease | |||
| 4835 | PerC family transcriptional regulator | |||
| 4840 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco0410ORF4840P |
| 4845 | LexA family transcriptional regulator | |||
| 8200 | TraR/DksA family transcriptional regulator | |||
| 8205 | M | M.Sen663ORF16605P (99% identity) | GATC | M.Eco0410ORF8205P |
| 8210 | replication endonuclease | |||
| 9135 | TrmB family transcriptional regulator | |||
| 9140 | M | M.Eco47SOC08ORF17420P (97% identity) | M.Eco0410ORF9140P | |
| 9145 | 178 aa hypothetical protein | |||
| 14535 | drug/metabolite exporter YedA | |||
| 14540 | V | V.SflFF64DcmP (100% identity) | V.Eco0410DcmP | |
| 14545 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco0410DcmP |
| 14550 | phosphohydrolase | |||
| 17325 | AAA family ATPase | |||
| 17330 | R | Kps623ORF16620P (100% identity) | Eco0410ORF17335P | |
| 17335 | M | M.Eco47C06ORF6565P (100% identity) | M.Eco0410ORF17335P | |
| 17340 | HigA family addiction module antidote protein | |||
| 22170 | DNA-binding transcriptional regulator Fis | |||
| 22175 | M | M.SspS13ORF21055P (99% identity) | ATGCAT | M.Eco0410ORF22175P |
| 22180 | DUF2556 family protein | |||
| 22725 | ribulose-phosphate 3-epimerase | |||
| 22730 | M | M.UbaC1152DamP (99% identity) | GATC | M.Eco0410DamP |
| 22735 | cell division protein DamX | |||
| 24505 | helix-turn-helix domain-containing protein | |||
| 24510 | M | M.EaeG7ORF400P (99% identity) | M.Eco0410ORF24510P | |
| 24515 | 182 aa hypothetical protein | |||
| plasmid pRHBSTW-00410_2 | ||||
| 26060 | 103 aa hypothetical protein | |||
| 26065 | M | M.Kpn1026ORFJP (100% identity) | M.Eco0410ORF26065P | |
| 26070 | 73 aa hypothetical protein | |||
| plasmid pRHBSTW-00410_3 | ||||
| 26635 | 101 aa hypothetical protein | |||
| 26640 | M | M.Sen527ORF25750P (100% identity) | M.Eco0410ORF26640P | |
| 26645 | 73 aa hypothetical protein | |||