Escherichia coli RHBSTW-00322 |
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Putative Escherichia coli RHBSTW-00322 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,073,815 bp | CP056598 |
| plasmid pRHBSTW-00322_2: | 124,230 bp | CP056599 |
| plasmid pRHBSTW-00322_3: | 93,526 bp | CP056600 |
REBASE acronym: Eco0322
Org_num: 42811
All begin HV160_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12435 | endoribonuclease SymE | |||
| 12440 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco0322ORF12445P |
| 12445 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco0322ORF12445P |
| 12450 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco0322ORF12445P |
| 12455 | adenine/cytosine-specific restriction | |||
| plasmid pRHBSTW-00322_2 | ||||
| 25105 | IS1 family transposase | |||
| 25110 | M | M.SflFF34ORF9300P (60% identity) | M.Eco0322ORF25110P | |
| 25115 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1100 | phosphohydrolase | |||
| 1105 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.Eco0322DcmP |
| 1110 | V | V.Ecostr9DcmP (74% identity) | V.Eco0322DcmP | |
| 1115 | drug/metabolite exporter YedA | |||
| 4745 | DUF1737 domain-containing protein | |||
| 4765 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco0322ORF4765P |
| 4770 | TrmB family transcriptional regulator | |||
| 5660 | NinE family protein | |||
| 5665 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco0322ORF5665P |
| 5670 | recombination protein NinB | |||
| 17680 | cell division protein DamX | |||
| 17685 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco0322DamP |
| 17690 | ribulose-phosphate 3-epimerase | |||
| 18210 | DUF2556 family protein | |||
| 18215 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco0322ORF18215P |
| 18220 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHBSTW-00322_2 | ||||
| 24590 | IS1 family transposase | |||
| 24595 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Eco0322ORF24595P |
| 24600 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco0322ORF24595P |
| 24605 | EAL domain-containing protein | |||
| 25045 | 73 aa hypothetical protein | |||
| 25050 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco0322ORF25050P |
| 25055 | 102 aa hypothetical protein | |||
| plasmid pRHBSTW-00322_3 | ||||
| 25290 | 103 aa hypothetical protein | |||
| 25295 | M | M.Sso80ORF24890P (100% identity) | M.Eco0322ORF25295P | |
| 25300 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12425 | R | SenHNK130McrCP (100% identity) | Eco0322McrCP | |
| 12430 | R | SenHNK130McrBP (100% identity) | Eco0322McrBP | |
| 12435 | endoribonuclease SymE | |||
| 12450 | type I restriction-modification system | |||
| 12455 | R | Ssp28760MrrP (100% identity) | Eco0322MrrP | |
| 12460 | GTPase | |||