Escherichia fergusonii RHB41-C23 |
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Putative Escherichia fergusonii RHB41-C23 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,565,833 bp | CP055599 |
| plasmid pRHB41-C23_2: | 113,051 bp | CP055600 |
| plasmid pRHB41-C23_3: | 112,380 bp | CP055601 |
| plasmid pRHB41-C23_4: | 46,375 bp | CP055602 |
| plasmid unnamed: | 33,901 bp | CP055603 |
REBASE acronym: Efe41C23
Org_num: 42157
All begin HV014_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10070 | restriction endonuclease | |||
| 10075 | M | M.EfeC03ORF10160P (100% identity) | M.Efe41C23ORF10075P | |
| 10080 | S | S.EfeC03ORF10160P (100% identity) | S.Efe41C23ORF10075P | |
| 10085 | R | EfeC03ORF10160P (100% identity) | Efe41C23ORF10075P | |
| 10090 | restriction endonuclease subunit S | |||
| 10170 | DUF4942 domain-containing protein | |||
| 10175 | M | M.EfeC03ORF10260P (100% identity) | M.Efe41C23ORF10175P | |
| 10180 | S | S.SensSZL38ORF395P (67% identity) | S.Efe41C23ORF10175P | |
| 10185 | R | EfeC03ORF10260P (99% identity) | Efe41C23ORF10175P | |
| 10195 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8325 | DUF1317 family protein | |||
| 8330 | M | M.EfeC13ORF14690P (100% identity) | M.Efe41C23ORF8330P | |
| 8335 | 93 aa hypothetical protein | |||
| 10825 | DNA-binding transcriptional regulator Fis | |||
| 10830 | M | M.EfeC18ORF19205P (100% identity) | M.Efe41C23ORF10830P | |
| 10835 | DUF2556 family protein | |||
| 11350 | ribulose-phosphate 3-epimerase | |||
| 11355 | M | M.EfeTDamP (100% identity) | M.Efe41C23DamP | |
| 11360 | cell division protein DamX | |||
| 14695 | bifunctional isocitrate dehydrogenase | |||
| 14700 | M | M.EfeC18ORF680P (100% identity) | M.Efe41C23ORF14700P | |
| 14705 | glyoxylate bypass operon transcriptional | |||
| 15560 | type I restriction-modification system subunit M | |||
| 15565 | RM | EcoC1747ORF4185P (100% identity) | CTGAAG | Efe41C23ORF15565P |
| 15570 | M | M.Eco9640ORFKP (100% identity) | CTGAAG | M.Efe41C23ORF15565P |
| 15575 | 62 aa hypothetical protein | |||
| plasmid pRHB41-C23_2 | ||||
| 22460 | 156 aa hypothetical protein | |||
| 22470 | M | M.EcoE2aORF26065P (99% identity) | M.Efe41C23ORF22470P | |
| 22475 | recombination-associated protein RdgC | |||
| plasmid pRHB41-C23_3 | ||||
| 22785 | 103 aa hypothetical protein | |||
| 22790 | M | M.StyR64ORFAP (100% identity) | M.Efe41C23ORF22790P | |
| 22795 | 73 aa hypothetical protein | |||
| plasmid pRHB41-C23_4 | ||||
| 23220 | 89 aa hypothetical protein | |||
| 23225 | M | M.EcosE1ORFFP (100% identity) | M.Efe41C23ORF23225P | |
| 23235 | 92 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 23630 | 75 aa hypothetical protein | |||
| 23635 | M | M.EfeEF02ORF219620P (100% identity) | M.Efe41C23ORF23635P | |
| 23640 | 90 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15545 | 141 aa hypothetical protein | |||
| 15550 | R | Eco9640McrBP (100% identity) | Efe41C23McrBP | |
| 15555 | R | Eco9640McrCP (100% identity) | Efe41C23McrCP | |
| 15560 | type I restriction-modification system subunit M | |||