Escherichia coli RHB34-C21 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB34-C21 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,576,076 bp | CP055649 |
| plasmid unnamed: | 96,848 bp | CP055650 |
REBASE acronym: Eco34C21
Org_num: 42144
All begin HVZ29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2650 | endoribonuclease SymE | |||
| 2655 | S | S.Eco47SOC08ORF2700P (67% identity) | S.Eco34C21ORF2660P | |
| 2660 | M | M.EcoA30I (99% identity) | M.Eco34C21ORF2660P | |
| 2665 | R | Eco0300ORF3080P (99% identity) | Eco34C21ORF2660P | |
| 2670 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2475 | DNA helicase | |||
| 2480 | R | EcoTrh52ORF17870P (99% identity) | Eco34C21ORF2480P | |
| 2485 | HNH endonuclease | |||
| 5775 | 93 aa hypothetical protein | |||
| 5780 | M | M.EcoR65ORF6360P (100% identity) | M.Eco34C21ORF5780P | |
| 5785 | DUF1317 family protein | |||
| 12470 | drug/metabolite exporter YedA | |||
| 12475 | V | V.Esp4742DcmP (100% identity) | V.Eco34C21DcmP | |
| 12480 | M | M.Eco17C17DcmP (100% identity) | CCWGG | M.Eco34C21DcmP |
| 12485 | phosphohydrolase | |||
| 15120 | 168 aa hypothetical protein | |||
| 15125 | M | M.Sen2187ORF6460P (93% identity) | M.Eco34C21ORF15125P | |
| 15130 | 89 aa hypothetical protein | |||
| 18895 | DNA-binding transcriptional regulator Fis | |||
| 18900 | M | M.Eco17C17ORF18850P (99% identity) | ATGCAT | M.Eco34C21ORF18900P |
| 18905 | DUF2556 family protein | |||
| 19425 | ribulose-phosphate 3-epimerase | |||
| 19430 | M | M.Esp4742DamP (100% identity) | GATC | M.Eco34C21DamP |
| 19435 | cell division protein DamX | |||
| plasmid unnamed | ||||
| 21945 | tellurite/colicin resistance protein | |||
| 21960 | M | M.EfeD053ORF22855P (99% identity) | M.Eco34C21ORF21960P | |
| 21965 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2640 | R | Eal13McrCP (98% identity) | Eco34C21McrCP | |
| 2645 | R | Efe5McrBP (97% identity) | Eco34C21McrBP | |
| 2650 | endoribonuclease SymE | |||
| 2665 | type I restriction-modification system | |||
| 2670 | R | EmaW492MrrP (100% identity) | Eco34C21MrrP | |
| 2675 | GTPase | |||