Escherichia coli RHB30-C19 |
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Putative Escherichia coli RHB30-C19 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,936,838 bp | CP055669 |
| plasmid pRHB30-C19_3: | 85,551 bp | CP055671 |
| plasmid unnamed: | 187,659 bp | CP055670 |
REBASE acronym: Eco30C19
Org_num: 42141
All begin HVY80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2950 | IS1-like element IS1A family transposase | |||
| 2955 | S | S.SflSTLE3ORF19325P (55% identity) | S.Eco30C19ORF2960P | |
| 2960 | M | M.SflSTLE3ORF19325P (100% identity) | M.Eco30C19ORF2960P | |
| 2965 | restriction endonuclease | |||
| plasmid pRHB30-C19_3 | ||||
| 25490 | type II toxin-antitoxin system Phd/YefM family | |||
| 25495 | M | M.Eco30C20ORF25535P (100% identity) | M.Eco30C19ORF25495P | |
| 25500 | S | S.Eco30C20ORF25535P (100% identity) | S.Eco30C19ORF25495P | |
| 25505 | R | Eco30C20ORF25535P (100% identity) | Eco30C19ORF25495P | |
| 25510 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | replication endonuclease | |||
| 15 | M | M.EcoDEC13DORF4454P (100% identity) | M.Eco30C19ORF15P | |
| 20 | 329 aa hypothetical protein | |||
| 13475 | drug/metabolite exporter YedA | |||
| 13480 | V | V.SflFF64DcmP (100% identity) | V.Eco30C19DcmP | |
| 13485 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco30C19DcmP |
| 13490 | phosphohydrolase | |||
| 15220 | 401 aa hypothetical protein | |||
| 15225 | M | M.Eco30C20ORF20875P (100% identity) | M.Eco30C19ORF15225P | |
| 15230 | holin | |||
| 16520 | PerC family transcriptional regulator | |||
| 16525 | M | M.EfeC18ORF5895P (100% identity) | M.Eco30C19ORF16525P | |
| 16530 | DUF1382 family protein | |||
| 17110 | 121 aa hypothetical protein | |||
| 17115 | R | Sso8033ORF3755P (100% identity) | Eco30C19ORF17120P | |
| 17120 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco30C19ORF17120P | |
| 17125 | 257 aa hypothetical protein | |||
| 20920 | DNA-binding transcriptional regulator Fis | |||
| 20925 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco30C19ORF20925P |
| 20930 | DUF2556 family protein | |||
| 21545 | ribulose-phosphate 3-epimerase | |||
| 21550 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco30C19DamP |
| 21555 | cell division protein DamX | |||
| plasmid unnamed | ||||
| 24710 | 284 aa hypothetical protein | |||
| 24715 | M | M.SenBL10ORFDP (100% identity) | M.Eco30C19ORF24715P | |
| 24720 | DNA-binding protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7160 | recombination protein NinB | |||
| 7165 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco30C19ORF7165P |
| 7170 | NinE family protein | |||