Escherichia coli RHB19-C14 |
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Putative Escherichia coli RHB19-C14 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,947,871 bp | CP055681 |
| plasmid pRHB19-C14_2: | 60,669 bp | CP055682 |
| plasmid unnamed: | 4,016 bp | CP055688 |
REBASE acronym: Eco19C14
Org_num: 42140
All begin HVX52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20465 | 322 aa hypothetical protein | |||
| 20470 | R | Eco19C10ORF20470P (100% identity) | Eco19C14ORF20475P | |
| 20475 | M | M.Ema777ORF2985P (100% identity) | M.Eco19C14ORF20475P | |
| 20480 | S | S.Eco45S0C05ORF19820P (100% identity) | S.Eco19C14ORF20475P | |
| 20485 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco19C14DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2345 | DUF2556 family protein | |||
| 2350 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco19C14ORF2350P |
| 2355 | DNA-binding transcriptional regulator Fis | |||
| 4915 | TraR/DksA family transcriptional regulator | |||
| 4920 | M | M.Eco19C10ORF4915P (100% identity) | M.Eco19C14ORF4920P | |
| 4925 | 273 aa hypothetical protein | |||
| 10750 | drug/metabolite exporter YedA | |||
| 10755 | V | V.Eco4221DcmP (74% identity) | V.Eco19C14DcmP | |
| 10760 | M | M.Eco4221DcmP (100% identity) | CCWGG | M.Eco19C14DcmP |
| 10765 | phosphohydrolase | |||
| 18490 | flagellar basal body P-ring formation protein | |||
| 18495 | M | M.Eco6C06ORF19785P (100% identity) | M.Eco19C14ORF18495P | |
| 18500 | R | Eco19C10ORF18490P (100% identity) | Eco19C14ORF18495P | |
| 18505 | flagellar biosynthesis anti-sigma factor FlgM | |||
| 20235 | phage lysis protein EssD | |||
| 20240 | M | M.EcoY18JORF19500P (100% identity) | M.Eco19C14ORF20240P | |
| 20245 | TrmB family transcriptional regulator | |||
| 20280 | LexA family transcriptional regulator | |||
| 20285 | M | M.Eco19C10ORF20280P (100% identity) | GATC | M.Eco19C14ORF20285P |
| 20290 | PerC family transcriptional regulator | |||
| 20675 | HNH endonuclease | |||
| 20680 | R | EcoLR13ORF25810P (100% identity) | Eco19C14ORF20680P | |
| 20685 | 59 aa hypothetical protein | |||
| plasmid pRHB19-C14_2 | ||||
| 23635 | 103 aa hypothetical protein | |||
| 23640 | M | M.Eco746ORF25930P (100% identity) | M.Eco19C14ORF23640P | |
| 23645 | 73 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 24485 | 73 aa hypothetical protein | |||
| 24490 | M | M.SspPIBORF23080P (100% identity) | M.Eco19C14ORF24490P | |