Escherichia coli RHB15-C06 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB15-C06 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,083,535 bp | CP055713 |
| plasmid pRHB15-C06_2: | 72,254 bp | CP055714 |
REBASE acronym: Eco15C06
Org_num: 42139
All begin HVX00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20670 | DUF4942 domain-containing protein | |||
| 20675 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.Eco15C06ORF20675P |
| 20680 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.Eco15C06ORF20675P |
| 20685 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | Eco15C06ORF20675P |
| 20695 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1675 | cell division protein DamX | |||
| 1680 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco15C06DamP |
| 1685 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco15C06ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 9400 | phosphohydrolase | |||
| 9405 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco15C06DcmP |
| 9410 | V | V.SflFF59DcmP (100% identity) | V.Eco15C06DcmP | |
| 9415 | drug/metabolite exporter YedA | |||
| 14410 | 92 aa hypothetical protein | |||
| 14415 | M | M.EcoW26ORF35400P (100% identity) | M.Eco15C06ORF14415P | |
| 14420 | TrmB family transcriptional regulator | |||
| 15745 | replication endonuclease | |||
| 15750 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco15C06ORF15750P |
| 15755 | TraR/DksA family transcriptional regulator | |||
| plasmid pRHB15-C06_2 | ||||
| 24580 | 103 aa hypothetical protein | |||
| 24585 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco15C06ORF24585P |
| 24590 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15070 | GTPase family protein | |||
| 15075 | M | M.Eal3449ORFFP (99% identity) | M.Eco15C06ORF15075P | |
| 15080 | R | Eal3449ORFFP (99% identity) | Eco15C06ORF15075P | |
| 15085 | 263 aa hypothetical protein | |||