Escherichia coli RHB13-C21 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB13-C21 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,907,213 bp | CP055718 |
| plasmid unnamed: | 5,480 bp | CP055721 |
REBASE acronym: Eco13C21
Org_num: 42138
All begin HVW84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20025 | DUF262 domain-containing protein | |||
| 20030 | R | Eco28C15ORF20380P (100% identity) | Eco13C21ORF20035P | |
| 20035 | M | M.EcoRM9088ORF13950P (100% identity) | M.Eco13C21ORF20035P | |
| 20040 | S | S.Eco28C15ORF20380P (100% identity) | S.Eco13C21ORF20035P | |
| 20045 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1910 | cell division protein DamX | |||
| 1915 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13C21DamP |
| 1920 | ribulose-phosphate 3-epimerase | |||
| 2450 | 28 aa hypothetical protein | |||
| 2455 | M | M.SspS13ORF21055P (50% identity) | M.Eco13C21ORF2455P | |
| 2460 | DNA-binding transcriptional regulator Fis | |||
| 7400 | flagella biosynthesis regulator Flk | |||
| 7405 | M | M.Sen7113ORF20540P (100% identity) | M.Eco13C21ORF7405P | |
| 7410 | Com family DNA-binding transcriptional | |||
| 9405 | phosphohydrolase | |||
| 9410 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco13C21DcmP |
| 9415 | V | V.EcoZYB62DcmP (100% identity) | V.Eco13C21DcmP | |
| 9420 | drug/metabolite exporter YedA | |||
| 11445 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco13C21ORF11450P | |
| 11455 | ISNCY family transposase | |||
| 17000 | DUF1317 family protein | |||
| 17005 | M | M.Sbo812ORFAP (100% identity) | M.Eco13C21ORF17005P | |
| 17010 | 94 aa hypothetical protein | |||
| 20265 | 52 aa hypothetical protein | |||
| 20270 | R | Ecoc171ORF20410P (100% identity) | Eco13C21ORF20270P | |
| 20275 | HNH endonuclease | |||
| 20320 | 5-nucleotidase | |||
| 20325 | R | EcoZYB39ORF460P (100% identity) | Eco13C21ORF20325P | |
| 20330 | integrase | |||
| 21690 | LexA family transcriptional regulator | |||
| 21695 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco13C21ORF21695P |
| 21700 | PerC family transcriptional regulator | |||
| plasmid unnamed | ||||
| 23950 | R | SenUA39ORF5P (100% identity) | Eco13C21ORF23955P | |
| 23955 | M | M.EcoH591ORF4942P (100% identity) | M.Eco13C21ORF23955P | |
| 23960 | MbeD family mobilization/exclusion protein | |||