Escherichia coli RHB12-C09 |
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Putative Escherichia coli RHB12-C09 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,072,844 bp | CP055736 |
| plasmid pRHB12-C09_2: | 108,124 bp | CP055737 |
| plasmid unnamed: | 22,968 bp | CP055740 |
REBASE acronym: Eco12C09
Org_num: 42136
All begin HVW64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18875 | type IV toxin-antitoxin system AbiEi family | |||
| 18880 | R | EcoRM9088ORF3290P (100% identity) | Eco12C09ORF18885P | |
| 18885 | M | M.Eco26C18ORF20500P (100% identity) | M.Eco12C09ORF18885P | |
| 18890 | S | S.Eco4151ORFAP (100% identity) | S.Eco12C09ORF18885P | |
| 18895 | ash family protein | |||
| 20925 | DUF262 domain-containing protein | |||
| 20930 | M | M.Eco43SEC07ORF20635P (100% identity) | M.Eco12C09ORF20930P | |
| 20935 | S | S.Eco43SEC07ORF20635P (100% identity) | S.Eco12C09ORF20930P | |
| 20940 | R | Eco20C11ORF2255P (99% identity) | Eco12C09ORF20930P | |
| 20945 | 237 aa hypothetical protein | |||
| 21155 | DUF4942 domain-containing protein | |||
| 21160 | M | M.Eco26C18ORF18230P (100% identity) | M.Eco12C09ORF21160P | |
| 21165 | S | S.Eco26C18ORF18230P (100% identity) | S.Eco12C09ORF21160P | |
| 21170 | R | Eco26C18ORF18230P (100% identity) | Eco12C09ORF21160P | |
| 21180 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1895 | cell division protein DamX | |||
| 1900 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco12C09DamP |
| 1905 | ribulose-phosphate 3-epimerase | |||
| 2410 | DUF2556 family protein | |||
| 2415 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco12C09ORF2415P |
| 2420 | DNA-binding transcriptional regulator Fis | |||
| 4175 | osmoprotectant transport activator ProQ | |||
| 4180 | M | M.SflFF24DndBP (100% identity) | M.Eco12C09DndBP | |
| 4185 | DNA phosphorothioation system sulfurtransferase | |||
| 4180 | DNA sulfur modification protein DndB | |||
| 4185 | M | M.SflFF24DndCP (100% identity) | M.Eco12C09DndCP | |
| 4190 | DNA sulfur modification protein DndD | |||
| 4185 | DNA phosphorothioation system sulfurtransferase | |||
| 4190 | M | M.SflFF24DndDP (100% identity) | M.Eco12C09DndDP | |
| 4195 | DNA sulfur modification protein DndE | |||
| 4190 | DNA sulfur modification protein DndD | |||
| 4195 | M | M.SflFF24DndEP (100% identity) | M.Eco12C09DndEP | |
| 4200 | DGQHR domain-containing protein | |||
| 4210 | accessory gene regulator B family protein | |||
| 4215 | R | EcosEC5DptHP (100% identity) | Eco12C09DptHP | |
| 4220 | DNA phosphorothioation-dependent restriction | |||
| 4215 | DNA phosphorothioation-dependent restriction | |||
| 4220 | R | SflFF24DptGP (100% identity) | Eco12C09DptGP | |
| 4225 | DNA phosphorothioation-dependent restriction | |||
| 4220 | DNA phosphorothioation-dependent restriction | |||
| 4225 | R | SflFF24DptFP (100% identity) | Eco12C09DptFP | |
| 4230 | porin family protein | |||
| 9405 | phosphohydrolase | |||
| 9410 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco12C09DcmP |
| 9415 | V | V.SsoSE61DcmP (100% identity) | V.Eco12C09DcmP | |
| 9420 | drug/metabolite exporter YedA | |||
| 11405 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco12C09ORF11410P | |
| 11415 | 60 aa hypothetical protein | |||
| 21135 | HNH endonuclease | |||
| 21140 | R | Eco26C18ORF18250P (100% identity) | Eco12C09ORF21140P | |
| 21145 | McrC family protein | |||
| plasmid pRHB12-C09_2 | ||||
| 24475 | 73 aa hypothetical protein | |||
| 24480 | M | M.SflN92ORF24820P (100% identity) | M.Eco12C09ORF24480P | |
| 24485 | 101 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 25115 | 73 aa hypothetical protein | |||
| 25120 | M | M.StyR64ORFAP (100% identity) | M.Eco12C09ORF25120P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21140 | HNH endonuclease | |||
| 21145 | R | Eco26C18McrCP (100% identity) | Eco12C09McrCP | |
| 21150 | R | Eco26C18McrBP (100% identity) | Eco12C09McrBP | |
| 21155 | DUF4942 domain-containing protein | |||