Escherichia coli Biosolid 42 |
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Putative Escherichia coli Biosolid 42 RM systems
Ref: Huang,H. et al. unpublished
REBASE ref # 30458
| Sequence length: | GenBank #: | |
| Chromosome: | 4,795,303 bp | CP058913 |
| plasmid pHH12_P1: | 109,732 bp | CP058914 |
| plasmid pHH12_P2: | 74,434 bp | CP058915 |
REBASE acronym: EcoB42
Org_num: 41977
All begin G9398_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pHH12_P1 | ||||
| 23755 | 158 aa hypothetical protein | |||
| 23760 | R | EcoHM107ORF23980P (100% identity) | EcoB42ORF23770P | |
| 23765 | S | S.EcoHM107ORF23980P (98% identity) | S.EcoB42ORF23770P | |
| 23770 | M | M.EcoHM107ORF23980P (100% identity) | M.EcoB42ORF23770P | |
| 23775 | DNA polymerase III subunit theta | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6050 | ribulose-phosphate 3-epimerase | |||
| 6055 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoB42DamP |
| 6060 | cell division protein DamX | |||
| 9725 | PerC family transcriptional regulator | |||
| 9730 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.EcoB42ORF9730P |
| 9735 | LexA family transcriptional regulator | |||
| 9760 | 67 aa hypothetical protein | |||
| 9765 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoB42ORF9765P | |
| 9770 | phage holin, lambda family | |||
| 11225 | McrC family protein | |||
| 11230 | R | SflSTLE4ORF19250P (100% identity) | EcoB42ORF11230P | |
| 11235 | HNH endonuclease | |||
| 17280 | holin | |||
| 17285 | M | M.SglORF828P (100% identity) | M.EcoB42ORF17285P | |
| 17290 | 177 aa hypothetical protein | |||
| 22265 | drug/metabolite exporter YedA | |||
| 22270 | V | V.SflFF64DcmP (100% identity) | V.EcoB42DcmP | |
| 22275 | M | M.EcosEC29DcmP (100% identity) | CCWGG | M.EcoB42DcmP |
| 22280 | phosphohydrolase | |||
| plasmid pHH12_P2 | ||||
| 24075 | 73 aa hypothetical protein | |||
| 24080 | M | M.EcoNIH4ORF28685P (100% identity) | M.EcoB42ORF24065P | |
| 24085 | 104 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11215 | DUF4942 domain-containing protein | |||
| 11220 | R | EcoHM107McrBP (100% identity) | EcoB42McrBP | |
| 11225 | R | SflSTLE4McrCP (100% identity) | EcoB42McrCP | |
| 11230 | HNH endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pHH12_P1 | ||||
| 23705 | 269 aa hypothetical protein | |||
| 23710 | M | M.EcoLR48ORF45220P (100% identity) | M.EcoB42ORF23710P | |
| 23715 | 76 aa hypothetical protein | |||