Escherichia coli WP8-S17-ESBL-12 |
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Putative Escherichia coli WP8-S17-ESBL-12 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
| Sequence length: | GenBank #: | |
| Chromosome: | 4,978,079 bp | AP022222 |
| plasmid pWP8-S17-ESBL-12_1: | 139,020 bp | AP022223 |
| plasmid pWP8-S17-ESBL-12_2: | 87,171 bp | AP022224 |
| plasmid pWP8-S17-ESBL-12_3: | 70,764 bp | AP022225 |
REBASE acronym: Eco7BL12
Org_num: 42014
All begin WP8S17E12_, WP8S17E12_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39090 | restriction endonuclease | |||
| 39100 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco7BL12ORF39110P |
| 39110 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco7BL12ORF39110P |
| 39120 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco7BL12ORF39110P |
| 39130 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3720 | cell division protein DamX | |||
| 3730 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco7BL12DamP |
| 3740 | ribulose-phosphate 3-epimerase | |||
| 4720 | 59 aa hypothetical protein | |||
| 4730 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco7BL12ORF4730P |
| 4740 | DNA-binding protein Fis | |||
| 12880 | serine/threonine protein phosphatase | |||
| 12890 | M | M.EcoPK8275ORF9875P (100% identity) | M.Eco7BL12ORF12890P | |
| 12900 | transcriptional activator | |||
| 18720 | phosphohydrolase | |||
| 18730 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.Eco7BL12DcmP |
| 18740 | V | V.Ecostr9DcmP (74% identity) | V.Eco7BL12DcmP | |
| 18750 | multidrug transporter | |||
| 26880 | protein ninX | |||
| 26890 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco7BL12ORF26890P |
| 26900 | protein ninB | |||
| plasmid pWP8-S17-ESBL-12_1 | ||||
| 10630 | 308 aa hypothetical protein | |||
| 10640 | M | M.Ecowhn14ORF35P (100% identity) | M.Eco7BL12ORF10640P | |
| 10650 | 73 aa hypothetical protein | |||
| plasmid pWP8-S17-ESBL-12_2 | ||||
| 20290 | 73 aa hypothetical protein | |||
| 20300 | M | M.Sso866ORF27155P (100% identity) | M.Eco7BL12ORF20300P | |
| 20310 | 308 aa hypothetical protein | |||
| plasmid pWP8-S17-ESBL-12_3 | ||||
| 30140 | 308 aa hypothetical protein | |||
| ??? | M | M.Kpn121ORF28445P (99% identity) | M.Eco7BL12ORF30150P | |
| 30160 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39080 | GTPase | |||
| 39090 | R | EcosS1MrrP (100% identity) | Eco7BL12MrrP | |
| 39100 | type I restriction-modification system | |||