Escherichia coli WP5-S18-ESBL-08 |
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Putative Escherichia coli WP5-S18-ESBL-08 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
| Sequence length: | GenBank #: | |
| Chromosome: | 5,189,151 bp | AP022161 |
| plasmid pWP5-S18-ESBL-08_1: | 147,186 bp | AP022162 |
| plasmid pWP5-S18-ESBL-08_2: | 97,833 bp | AP022163 |
| plasmid pWP5-S18-ESBL-08_3: | 47,454 bp | AP022164 |
REBASE acronym: Eco5L08
Org_num: 42006
All begin WP5S18E08_, WP5S18E08_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20040 | 183 aa hypothetical protein | |||
| 20050 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco5L08ORF20050P |
| 20060 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco5L08ORF20050P |
| 20070 | 227 aa hypothetical protein | |||
| 20080 | 620 aa hypothetical protein | |||
| 20090 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco5L08ORF20050P |
| 20100 | metal-dependent hydrolase | |||
| plasmid pWP5-S18-ESBL-08_2 | ||||
| 20010 | M | M.Eco34C14ORF22480P (100% identity) | GAANNNNNNTAYG | M.Eco5L08ORF20010P |
| 20020 | S | S.EcoGD31ORF25740P (100% identity) | GAANNNNNNTAYG | S.Eco5L08ORF20010P |
| 20030 | R | Eco34C14ORF22480P (99% identity) | GAANNNNNNTAYG | Eco5L08ORF20010P |
| 20040 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3600 | cell division protein DamX | |||
| 3610 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco5L08DamP |
| 3620 | ribulose-phosphate 3-epimerase | |||
| 4600 | 59 aa hypothetical protein | |||
| ??? | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco5L08ORF4610P |
| 4630 | DNA-binding protein Fis | |||
| 13210 | 64 aa hypothetical protein | |||
| 13220 | M | M.EcoEC0155ORF12710P (100% identity) | M.Eco5L08ORF13220P | |
| 13230 | transcriptional activator | |||
| 19540 | phosphohydrolase | |||
| 19550 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco5L08DcmP |
| 19560 | V | V.Ecos142DcmP (100% identity) | V.Eco5L08DcmP | |
| 19570 | amino acid exporter for phenylalanine, | |||
| 28280 | anti-adapter protein IraM | |||
| 28290 | M | M.EcoD02AORF14350P (100% identity) | M.Eco5L08ORF28290P | |
| 28300 | 65 aa hypothetical protein | |||
| 31570 | replication endonuclease from | |||
| 31580 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco5L08ORF31580P |
| 31590 | 75 aa hypothetical protein | |||
| 41180 | RM | Fnu048ORFEP (100% identity) | Eco5L08ORF41180P | |
| 41190 | ATP-dependent helicase | |||
| 41280 | 216 aa hypothetical protein | |||
| 41290 | R | Fnu048ORFUP (96% identity) | Eco5L08ORF41290P | |
| 41300 | 154 aa hypothetical protein | |||
| 44420 | LexA family transcriptional regulator | |||
| 44430 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco5L08ORF44430P |
| 44440 | 160 aa hypothetical protein | |||
| plasmid pWP5-S18-ESBL-08_1 | ||||
| 11200 | 308 aa hypothetical protein | |||
| 11210 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco5L08ORF11210P |
| 11220 | 73 aa hypothetical protein | |||
| plasmid pWP5-S18-ESBL-08_2 | ||||
| 20230 | tellurite resistance protein | |||
| 20240 | M | M.Eco17550ORF4553P (100% identity) | M.Eco5L08ORF20240P | |
| 20250 | recombination-associated protein RdgC | |||
| plasmid pWP5-S18-ESBL-08_3 | ||||
| 30200 | 92 aa hypothetical protein | |||
| 30210 | M | M.Efe41C23ORF23225P (100% identity) | M.Eco5L08ORF30210P | |
| 30220 | 89 aa hypothetical protein | |||