Escherichia coli WP4-S18-ESBL-07 |
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Putative Escherichia coli WP4-S18-ESBL-07 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
| Sequence length: | GenBank #: | |
| Chromosome: | 4,996,252 bp | AP022087 |
| plasmid pWP4-S18-ESBL-07_1: | 183,772 bp | AP022088 |
| plasmid pWP4-S18-ESBL-07_2: | 110,167 bp | AP022089 |
| plasmid pWP4-S18-ESBL-07_3: | 80,029 bp | AP022090 |
| plasmid pWP4-S18-ESBL-07_4: | 74,261 bp | AP022091 |
REBASE acronym: Eco4S18
Org_num: 41998
All begin WP4S18E07_, WP4S18E07_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4790 | 191 aa hypothetical protein | |||
| 4800 | M | M.Ssp28760ORF20045P (75% identity) | M.Eco4S18ORF4800P | |
| 4810 | DNA-binding protein Fis | |||
| 39690 | 635 aa hypothetical protein | |||
| 39700 | R | SspPIBORF19375P (100% identity) | Eco4S18ORF39720P | |
| 39710 | S | S.SspPIBORF19375P (100% identity) | S.Eco4S18ORF39720P | |
| 39720 | M | M2.SspPIBORF19375P (100% identity) | M2.Eco4S18ORF39720P | |
| 39730 | M | M1.SspPIBORF19375P (100% identity) | M1.Eco4S18ORF39720P | |
| 39740 | 120 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3610 | cell division protein DamX | |||
| 3620 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4S18DamP |
| 3630 | ribulose-phosphate 3-epimerase | |||
| 11720 | 90 aa hypothetical protein | |||
| 11730 | R | R1.EcoST70ORF6140P (100% identity) | R1.Eco4S18ORF11750P | |
| 11740 | 242 aa hypothetical protein | |||
| 11750 | M | M.EcoST70ORF6140P (100% identity) | M.Eco4S18ORF11750P | |
| 11760 | integrase | |||
| 18600 | phosphohydrolase | |||
| 18610 | M | M.SspPIBDcmP (100% identity) | CCWGG | M.Eco4S18DcmP |
| 18620 | V | V.SspPIBDcmP (100% identity) | V.Eco4S18DcmP | |
| 18630 | inner membrane transporter YedA | |||
| 32940 | 53 aa hypothetical protein | |||
| 32950 | M | M.Sbo812ORFAP (100% identity) | M.Eco4S18ORF32950P | |
| 32960 | cell division protein ZapA | |||
| plasmid pWP4-S18-ESBL-07_1 | ||||
| 11100 | 191 aa hypothetical protein | |||
| 11110 | M | M.EcoC0488ORF26050P (74% identity) | M.Eco4S18ORF11110P | |
| 11120 | 308 aa hypothetical protein | |||
| plasmid pWP4-S18-ESBL-07_2 | ||||
| 21000 | 269 aa hypothetical protein | |||
| 21010 | M | M.Sso8361ORFCP (100% identity) | M.Eco4S18ORF21010P | |
| 21020 | 76 aa hypothetical protein | |||
| plasmid pWP4-S18-ESBL-07_3 | ||||
| 30150 | 314 aa hypothetical protein | |||
| 30160 | M | M.Eco4S18ORF40750P (90% identity) | M.Eco4S18ORF30160P | |
| 30170 | 308 aa hypothetical protein | |||
| plasmid pWP4-S18-ESBL-07_4 | ||||
| 40740 | plasmid stability protein StbA | |||
| 40750 | M | M.Eco4S18ORF30160P (90% identity) | M.Eco4S18ORF40750P | |
| 40760 | 314 aa hypothetical protein | |||