Escherichia coli WP4-W18-ESBL-09 |
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Putative Escherichia coli WP4-W18-ESBL-09 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
| Sequence length: | GenBank #: | |
| Chromosome: | 5,289,055 bp | AP022069 |
| plasmid pWP4-W18-ESBL-09_1: | 117,617 bp | AP022070 |
| plasmid pWP4-W18-ESBL-09_2: | 84,553 bp | AP022071 |
| plasmid pWP4-W18-ESBL-09_3: | 77,891 bp | AP022072 |
REBASE acronym: Eco4L09
Org_num: 42002
All begin WP4W18E09_, WP4W18E09_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2560 | 95 aa hypothetical protein | |||
| 2570 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | Eco4L09ORF2620P |
| 2580 | 879 aa hypothetical protein | |||
| 2590 | transcriptional regulator | |||
| 2600 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S.Eco4L09ORF2620P |
| 2610 | anticodon nuclease | |||
| 2620 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.Eco4L09ORF2620P |
| 2630 | 400 aa hypothetical protein | |||
| 40820 | restriction endonuclease | |||
| 40830 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco4L09ORF40840P |
| 40840 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco4L09ORF40840P |
| 40850 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco4L09ORF40840P |
| 40860 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3750 | cell division protein DamX | |||
| 3760 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4L09DamP |
| 3770 | ribulose-phosphate 3-epimerase | |||
| 4750 | 59 aa hypothetical protein | |||
| 4760 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco4L09ORF4760P |
| 4770 | DNA-binding protein Fis | |||
| 18690 | 142 aa hypothetical protein | |||
| 18700 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco4L09DcmP |
| 18710 | V | V.SflSTLE3DcmP (100% identity) | V.Eco4L09DcmP | |
| 18720 | amino acid exporter for phenylalanine, | |||
| 26830 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 26840 | M | M.SboBSORF1444P (100% identity) | A | M.Eco4L09ORF26840P |
| 26850 | 65 aa hypothetical protein | |||
| 26880 | bacteriophage protein | |||
| 26890 | M | M.Ecoppa4ORF685P (93% identity) | M.Eco4L09ORF26890P | |
| 26900 | R | Ecoppa4ORF685P (100% identity) | Eco4L09ORF26890P | |
| 26910 | 44 aa hypothetical protein | |||
| plasmid pWP4-W18-ESBL-09_1 | ||||
| 10890 | 73 aa hypothetical protein | |||
| 10900 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco4L09ORF10900P |
| 10910 | 308 aa hypothetical protein | |||
| plasmid pWP4-W18-ESBL-09_2 | ||||
| 20660 | 308 aa hypothetical protein | |||
| 20670 | M | M.SsoST152ORF25555P (100% identity) | M.Eco4L09ORF20670P | |
| 20680 | 73 aa hypothetical protein | |||
| plasmid pWP4-W18-ESBL-09_3 | ||||
| 30890 | 308 aa hypothetical protein | |||
| 30900 | M | M.EcosB2CORFHP (100% identity) | M.Eco4L09ORF30900P | |
| 30910 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 40810 | GTPase | |||
| 40820 | R | EcosS1MrrP (100% identity) | Eco4L09MrrP | |
| 40830 | type I restriction-modification system | |||