Escherichia coli WCHEC035125 |
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Putative Escherichia coli WCHEC035125 RM systems
Ref: Ma,K. et al. unpublished
REBASE ref # 30928
| Sequence length: | GenBank #: | |
| Chromosome: | 4,696,162 bp | CP058656 |
| plasmid p1_035125: | 122,305 bp | CP058658 |
| plasmid p2_035125: | 89,623 bp | CP058659 |
REBASE acronym: Eco35125
Org_num: 41984
All begin HZR25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5710 | IS1 family transposase | |||
| 5715 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco35125ORF5725P |
| 5720 | S | S.Eco35148ORF7765P (100% identity) | ACAYNNNNCTG | S.Eco35125ORF5725P |
| 5725 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco35125ORF5725P |
| 5730 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco35125DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 2420 | DUF2556 family protein | |||
| 2425 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco35125ORF2425P |
| 2430 | tyrosine-type recombinase/integrase | |||
| 8885 | phosphohydrolase | |||
| 8890 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco35125DcmP |
| 8895 | V | V.EcosEC7DcmP (100% identity) | V.Eco35125DcmP | |
| 8900 | drug/metabolite exporter YedA | |||
| 19005 | phage lysis protein EssD | |||
| 19010 | M | M.Eco35148ORF21985P (100% identity) | M.Eco35125ORF19010P | |
| 19015 | 67 aa hypothetical protein | |||
| 19045 | LexA family transcriptional regulator | |||
| 19050 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco35125ORF19050P |
| 19055 | PerC family transcriptional regulator | |||
| plasmid p1_035125 | ||||
| 23340 | 73 aa hypothetical protein | |||
| 23345 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco35125ORF23345P | |
| 23350 | 102 aa hypothetical protein | |||
| plasmid p2_035125 | ||||
| 23705 | glutamine--tRNA ligase | |||
| 23710 | M | M.EcoJS316ORF22690P (100% identity) | M.Eco35125ORF23710P | |
| 23715 | 226 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12985 | isocitrate dehydrogenase | |||
| 12990 | R | EcosEC27McrCP (100% identity) | Eco35125McrCP | |
| 12995 | R | EcoteDMcrBP (100% identity) | Eco35125McrBP | |
| 13000 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14555 | replication endonuclease | |||
| 14560 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco35125ORF14560P |
| 14565 | TraR/DksA family transcriptional regulator | |||