Escherichia coli 2D |
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Putative Escherichia coli 2D RM systems
Ref: Zheng,W. unpublished
REBASE ref # 29466
| Sequence length: | GenBank #: | |
| Chromosome: | 5,132,980 bp | CP059003 |
| plasmid p2D-3: | 79,323 bp | CP059005 |
| plasmid p2D-CTX-M-14: | 96,499 bp | CP059004 |
REBASE acronym: Eco2D
Org_num: 41974
All begin H0E72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22890 | type II toxin-antitoxin system RelB/DinJ family | |||
| 22895 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.Eco2DORF22895P |
| 22900 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.Eco2DORF22895P |
| 22905 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | Eco2DORF22895P |
| 22910 | 184 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | 68 aa hypothetical protein | |||
| 25 | M | M.EcosE2ORF21575P (100% identity) | M.Eco2DORF25P | |
| 30 | 341 aa hypothetical protein | |||
| 2180 | 332 aa hypothetical protein | |||
| 2185 | R | EcoXDLORF21295P (100% identity) | Eco2DORF2185P | |
| 2190 | HNH endonuclease | |||
| 2225 | DEAD/DEAH box helicase | |||
| 2230 | RM | EcoXDLORF21245P (100% identity) | Eco2DORF2230P | |
| 8555 | TrmB family transcriptional regulator | |||
| 8560 | M | M.EcoC311ORF14235P (99% identity) | M.Eco2DORF8560P | |
| 8565 | phage lysis protein EssD | |||
| 8760 | HD domain-containing protein | |||
| 8765 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco2DDcmP |
| 8770 | V | V.SflSTLE3DcmP (100% identity) | V.Eco2DDcmP | |
| 8775 | drug/metabolite exporter YedA | |||
| 20745 | DNA-binding transcriptional regulator Fis | |||
| 20750 | M | M.Ecost20ORFAP (100% identity) | ATGCAT | M.Eco2DORF20750P |
| 20755 | DUF2556 family protein | |||
| 21275 | ribulose-phosphate 3-epimerase | |||
| 21280 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2DDamP |
| 21285 | cell division protein DamX | |||
| plasmid p2D-3 | ||||
| 25485 | conjugal transfer mating pair stabilization | |||
| ??? | M | M.EcoP006ORFAP (100% identity) | M.Eco2DORF25490P | |
| 25500 | 102 aa hypothetical protein | |||
| plasmid p2D-CTX-M-14 | ||||
| 24710 | 104 aa hypothetical protein | |||
| 24715 | M | M.Sso866ORF27155P (100% identity) | M.Eco2DORF24715P | |
| 24720 | 73 aa hypothetical protein | |||